Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5p01
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54H40 Cluster: Putative uncharacterized protein; n=3; ...    33   5.1  
UniRef50_Q233Z3 Cluster: Protein kinase domain containing protei...    33   5.1  
UniRef50_UPI0000E46231 Cluster: PREDICTED: similar to egg bindin...    33   9.0  
UniRef50_UPI0000660B53 Cluster: Homolog of Homo sapiens "RNA bin...    33   9.0  

>UniRef50_Q54H40 Cluster: Putative uncharacterized protein; n=3;
           Eukaryota|Rep: Putative uncharacterized protein -
           Dictyostelium discoideum AX4
          Length = 1419

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 154 RNPAEDEFIIRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVRRTKH 288
           +N  E E I++  +  D KEK+RKR    E+ +  SN +V + KH
Sbjct: 185 KNKKEQEEIVKENKEIDKKEKKRKRD---EKEKDKSNDTVEKEKH 226


>UniRef50_Q233Z3 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 1235

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 22/92 (23%), Positives = 43/92 (46%)
 Frame = +1

Query: 19  STRRTHHVSAGVIVRVGRRRSALLQSNANRRFKRSGRLREYCVSNRNPAEDEFIIRSLRR 198
           S+R  + +S  +I ++ R+ S  +QS       R G ++    +N+   +   I+R    
Sbjct: 670 SSRSANKISQNMIKKIIRQPSTHIQSEEGNSIIRRGNIQ----NNKLNQQVNAIVRKNSY 725

Query: 199 FDVKEKQRKRQSVTEQSRCPSNGSVRRTKHPV 294
           +  + +Q +R+   E+S   SN  V  T H +
Sbjct: 726 WQNQREQLERKKKKEKSMISSNNDVTETHHTI 757


>UniRef50_UPI0000E46231 Cluster: PREDICTED: similar to egg bindin
            receptor 1 precursor; n=1; Strongylocentrotus
            purpuratus|Rep: PREDICTED: similar to egg bindin receptor
            1 precursor - Strongylocentrotus purpuratus
          Length = 3141

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -3

Query: 363  EMTTSTARESPPKLFLSVPIS-TLYGVFGSTNASITWTSALFCN*LSLPL 217
            ++T    R++ P +F   PI  T+Y   GSTN +I WT ++  +   LP+
Sbjct: 1677 DVTVILLRDNVPPVFDYCPIDFTVYTEVGSTNRTIFWTESIASDATGLPV 1726


>UniRef50_UPI0000660B53 Cluster: Homolog of Homo sapiens "RNA
           binding protein; n=1; Takifugu rubripes|Rep: Homolog of
           Homo sapiens "RNA binding protein - Takifugu rubripes
          Length = 459

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 22/75 (29%), Positives = 39/75 (52%)
 Frame = +1

Query: 91  QSNANRRFKRSGRLREYCVSNRNPAEDEFIIRSLRRFDVKEKQRKRQSVTEQSRCPSNGS 270
           +S +N + KR  R RE     R+ + +   +   RR   KEK+ +RQS+ +++R  S+ +
Sbjct: 247 RSKSNEKVKRRSRSREVDKGRRSRSRE---MDKGRRSRSKEKRDQRQSLPQRARRDSSSA 303

Query: 271 VRRTKHPVQS*DRYR 315
              +  P Q  +R R
Sbjct: 304 SSTSPQPKQDRNRNR 318


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,236,460
Number of Sequences: 1657284
Number of extensions: 11175168
Number of successful extensions: 31808
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31787
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)