Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5p01
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022969-6|AAB69890.1|  136|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF101319-6|AAC69351.1|  314|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL032639-5|CAA21629.1|  342|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helical...    27   9.8  
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical...    27   9.8  
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ...    27   9.8  

>AF022969-6|AAB69890.1|  136|Caenorhabditis elegans Hypothetical
           protein C29G2.1 protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 82  ALLQSNANRRFKRSGRLREYCVSNR 156
           AL+ +  NR+FK+S +L +YC S +
Sbjct: 90  ALVTNGDNRQFKKSKKLDQYCASGK 114


>Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical
           protein C09G9.4 protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 576 LLHNFEISKSSLSYAILVFNNYLFKKKIVNY 668
           + HN+ +  S+L ++I+ F+  +  K +VNY
Sbjct: 512 MFHNYLVLSSTLKFSIVSFHGKVLIKSVVNY 542


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 508 ARFRDCTSSTAESVRVPLPTWSTLFCSTKK 419
           AR +  TSST E  R P   W T+ C  K+
Sbjct: 274 ARLKSITSSTLERGRPPASLWLTIPCEEKE 303


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 508 ARFRDCTSSTAESVRVPLPTWSTLFCSTKK 419
           AR +  TSST E  R P   W T+ C  K+
Sbjct: 274 ARLKSITSSTLERGRPPASLWLTIPCEEKE 303


>AF101319-6|AAC69351.1|  314|Caenorhabditis elegans Hypothetical
           protein K08D9.1 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 324 ALEVILVPLKSSFLVEGVSMQTLWL 398
           A+ +++ PL S ++ E +S+QT WL
Sbjct: 72  AIPILVTPLLSPYIQENISLQTGWL 96


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 181 IRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVRRTKHPVQS 300
           +R +R    + ++RKR  + +   CP      +T HP++S
Sbjct: 853 VRRVRSAMPRRRKRKRVKIKKSRSCPILWKTEKTPHPMKS 892


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 181 IRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVRRTKHPVQS 300
           +R +R    + ++RKR  + +   CP      +T HP++S
Sbjct: 853 VRRVRSAMPRRRKRKRVKIKKSRSCPILWKTEKTPHPMKS 892


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 181 IRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVRRTKHPVQS 300
           +R +R    + ++RKR  + +   CP      +T HP++S
Sbjct: 853 VRRVRSAMPRRRKRKRVKIKKSRSCPILWKTEKTPHPMKS 892


>AL032639-5|CAA21629.1|  342|Caenorhabditis elegans Hypothetical
           protein Y38F1A.4 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 39  CICWCYCSRRPSP 77
           C C+CYC  RP P
Sbjct: 275 CYCYCYCEPRPPP 287


>Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical
           protein ZK856.1 protein.
          Length = 765

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 267 KRSSNQTPRTKLRSVPIRKALEVILVPLKSSFLVEGVSM 383
           +RS  +TP   +R+V + K  E+I + +    LVE + +
Sbjct: 108 RRSVPETPEESIRTVMLEKWNEIIFMNISEQLLVEALRL 146


>U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helically
           twisted, animalsroll when moving protein 3, isoform c
           protein.
          Length = 1310

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 600 KSSLSYAILVFNNYLFKKKIVNY 668
           +SSLSY +L  NN +    +VNY
Sbjct: 770 RSSLSYTVLFLNNLISDLPVVNY 792


>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
            twisted, animalsroll when moving protein 3, isoform a
            protein.
          Length = 2456

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 600  KSSLSYAILVFNNYLFKKKIVNY 668
            +SSLSY +L  NN +    +VNY
Sbjct: 1916 RSSLSYTVLFLNNLISDLPVVNY 1938


>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
            protein Y80D3A.8 protein.
          Length = 1293

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +1

Query: 115  KRSGRLREYCVSNRNPAEDEFIIRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVR 276
            KR  + +E         E+E +I   +R +  E+QRKR++  ++     N  VR
Sbjct: 891  KREEKRKEEEAEEERKREEEKLIAERKRIEEVEEQRKREAEDKEKIEQLNAKVR 944


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,104,175
Number of Sequences: 27780
Number of extensions: 272583
Number of successful extensions: 846
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)