Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5o23
         (681 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0451 + 3499084-3501757,3501907-3502275,3502358-3502389           30   1.5  
03_05_0931 - 28912700-28913056,28913245-28913319,28913424-289134...    29   3.4  
03_05_0884 - 28487013-28487271,28487355-28487516,28487594-284878...    29   3.4  
02_02_0536 + 11304298-11304400,11304731-11305797,11306026-113064...    29   4.5  
03_05_0668 - 26584865-26585058,26587411-26587846,26587962-265880...    28   7.9  

>11_01_0451 + 3499084-3501757,3501907-3502275,3502358-3502389
          Length = 1024

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 534  DIVMPEVMDAKQTSRFEIPNSCREMLGECIVNGSGEGCLCAQM 662
            +IV PE++D KQ    EIP + +E   EC+V+    G  C ++
Sbjct: 947  NIVDPELLDDKQLQ--EIPVTMKEKCIECLVSVLNTGLCCVKI 987


>03_05_0931 -
           28912700-28913056,28913245-28913319,28913424-28913497,
           28913604-28913691,28913785-28913936,28914050-28914209,
           28914303-28914458,28914566-28914784,28915390-28915650,
           28917183-28917389,28917488-28917619
          Length = 626

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +3

Query: 309 DPAPQSDANSWTKSLDREKNVSENFCDGCECSKVDEVKDTKLKTCLQNTISTTMTDLENR 488
           D +PQ   N WT SL+   + + N  +     K +    +K  T +++ I    T++  R
Sbjct: 107 DSSPQLKVNKWTMSLNDRVSAATNLLEELRAMKAER---SKQFTAIRSEIDKISTEISGR 163

Query: 489 T 491
           +
Sbjct: 164 S 164


>03_05_0884 -
           28487013-28487271,28487355-28487516,28487594-28487802,
           28488490-28488630,28488876-28489071,28489207-28489379,
           28490095-28490142,28490301-28490378,28490526-28490792,
           28491689-28491842,28491928-28492064,28492459-28492536,
           28493039-28493216,28493589-28493803,28494063-28494422,
           28494497-28494973,28495561-28495665,28495838-28496020,
           28496105-28496263,28496937-28497154,28497737-28497905,
           28498262-28498568,28498699-28498826,28498902-28499060,
           28499194-28499364,28500258-28500376,28500604-28500853,
           28501007-28501759
          Length = 1950

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 397 SQPSQKFSLTFFSRSSDFVQLFASDWGAGSS*PSPILRLICSHKHSRPS 251
           S  +Q+ S           +L  +  GAGSS P+P+L  + SH    PS
Sbjct: 38  SASAQRASRAHLHSLLALARLLPAGAGAGSSLPAPLLAFLASHAFLSPS 86


>02_02_0536 +
           11304298-11304400,11304731-11305797,11306026-11306416,
           11307164-11308041
          Length = 812

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 240 LLESEGRECLCEQMSRRIGEGYDDPAPQSDANSWTKSLDREKNVSENFC--DGCECSKVD 413
           L E++ +E LC    +R  +G   P P  D N      D EKN   N C   GC C + D
Sbjct: 489 LNETQRQEILCAV--KRDDQGR--PLPDRDGNG--NPTDEEKNAEINCCQDSGCSCYEPD 542

Query: 414 EVKD 425
             ++
Sbjct: 543 NSEE 546


>03_05_0668 -
           26584865-26585058,26587411-26587846,26587962-26588016,
           26588299-26588642
          Length = 342

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 545 HYYIAYIKHFYSSIHYFNSSIF*ISHC 465
           +YY AY KH     HY   S++  +HC
Sbjct: 179 NYYEAYKKHIVRKYHYEYESVWYKNHC 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,131,486
Number of Sequences: 37544
Number of extensions: 269715
Number of successful extensions: 747
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)