Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5o23
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    30   1.3  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    30   1.3  
AF101305-5|AAF98597.2|  341|Caenorhabditis elegans Serpentine re...    29   2.3  
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p...    29   3.1  
AF022975-8|AAB70667.4|  195|Caenorhabditis elegans Hypothetical ...    29   3.1  
AM748823-1|CAO72177.1|  491|Caenorhabditis elegans hexosaminidas...    28   5.4  
AC103567-3|AAL35732.2|  438|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...    28   7.1  
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...    28   7.1  
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    27   9.4  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        27   9.4  

>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +3

Query: 360  EKNVSENFCDGCECSKVDEVKDTK----LKTCLQNTISTTMTDLENRTIKVVNGAIKVLD 527
            E   S++ CD C   +VD    ++    L   ++  IS T+  +E+R     +GA     
Sbjct: 961  EVKCSDDVCDQCRQMEVDAQNGSENMRGLVREMRKRISDTLKTVESRAESKEDGADIKYG 1020

Query: 528  ICDIVMPEVMDAKQTSRFEIPNSCREML 611
            IC + + ++           P+ C+E L
Sbjct: 1021 ICSVFIDKLRKLTSRQSTSPPSICQECL 1048


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +3

Query: 360  EKNVSENFCDGCECSKVDEVKDTK----LKTCLQNTISTTMTDLENRTIKVVNGAIKVLD 527
            E   S++ CD C   +VD    ++    L   ++  IS T+  +E+R     +GA     
Sbjct: 961  EVKCSDDVCDQCRQMEVDAQNGSENMRGLVREMRKRISDTLKTVESRAESKEDGADIKYG 1020

Query: 528  ICDIVMPEVMDAKQTSRFEIPNSCREML 611
            IC + + ++           P+ C+E L
Sbjct: 1021 ICSVFIDKLRKLTSRQSTSPPSICQECL 1048


>AF101305-5|AAF98597.2|  341|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 3 protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -2

Query: 572 CLLCI----HYFWHYYIAYIKHFYSSIHYFNSSIF*ISHC 465
           C++CI    +  W  Y +   HF S I  F ++ F + HC
Sbjct: 30  CIMCIPISIYSLWRIYFSVKLHFNSKIVLFTNNTFVLIHC 69


>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
           protein F47A4.5 protein.
          Length = 1071

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 25/110 (22%), Positives = 47/110 (42%)
 Frame = +3

Query: 303 YDDPAPQSDANSWTKSLDREKNVSENFCDGCECSKVDEVKDTKLKTCLQNTISTTMTDLE 482
           Y D APQS  +      +  +++++  C+    S+     D+   T + ++ +TT T  +
Sbjct: 117 YRDEAPQSQKSV----ANSRQDLTQTSCEVVTVSETVVNADSITTTTVTSSTTTTATASQ 172

Query: 483 NRTIKVVNGAIKVLDICDIVMPEVMDAKQTSRFEIPNSCREMLGECIVNG 632
              I V     +   +CD  MP ++D K  +     +S    +   I NG
Sbjct: 173 EDFIMVEAEQDETAGLCDATMP-LVDKKNITTSSTTSSPSRQITPRIENG 221


>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
            protein C56C10.12 protein.
          Length = 1599

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -3

Query: 388  SQKFSLTFFSRSSDFVQL-FASDWGAG-SS*PSPILRLICS 272
            + K  +T F R     QL +A  W +G SS P+PI++LICS
Sbjct: 977  ADKNFMTTFERLLHIDQLPYAVQWLSGPSSTPTPIVKLICS 1017


>AF022975-8|AAB70667.4|  195|Caenorhabditis elegans Hypothetical
           protein K09C6.9 protein.
          Length = 195

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +3

Query: 438 TCLQNTISTTMTDLENRTIKVVNGAIKVLDICDIVMPEVMDAKQTSRF-EIPNSCREMLG 614
           T L + +S   T   N    V+N A+  LD C     +  +AKQT+   ++  +C  M+ 
Sbjct: 93  TNLSDLVSKLATPFINLCKPVINKALSTLDTCKANNKQTGNAKQTACMNKVYTNCIAMVT 152

Query: 615 ECIVN 629
           +  VN
Sbjct: 153 KQFVN 157


>AM748823-1|CAO72177.1|  491|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 342 SSYSHLIGELDHHSPRQFSGSFVHINILGLQTRV 241
           SSY+   G +D    RQF    VH+++ G   RV
Sbjct: 32  SSYAAYEGGIDPRKTRQFKNIIVHLDLKGAPPRV 65


>AC103567-3|AAL35732.2|  438|Caenorhabditis elegans Hypothetical
           protein Y51F10.5 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 342 SSYSHLIGELDHHSPRQFSGSFVHINILGLQTRV 241
           SSY+   G +D    RQF    VH+++ G   RV
Sbjct: 32  SSYAAYEGGIDPRKTRQFKNIIVHLDLKGAPPRV 65


>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 285 RRIGEGYDDPAPQSDANSW 341
           R IG  +DDPA QSD   W
Sbjct: 72  RLIGRKFDDPAVQSDMKHW 90


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 285 RRIGEGYDDPAPQSDANSW 341
           R IG  +DDPA QSD   W
Sbjct: 72  RLIGRKFDDPAVQSDMKHW 90


>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
            protein F43G9.6 protein.
          Length = 2034

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 563  CIHYFWHYY 537
            CI YFWHYY
Sbjct: 1989 CIKYFWHYY 1997


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 563  CIHYFWHYY 537
            CI YFWHYY
Sbjct: 1989 CIKYFWHYY 1997


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,989,379
Number of Sequences: 27780
Number of extensions: 272166
Number of successful extensions: 870
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)