Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5o22
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical ... 45 5e-05
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 38 0.009
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z67734-3|CAA91529.2| 1050|Caenorhabditis elegans Hypothetical pr... 31 0.61
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 31 0.80
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL032654-3|CAE54915.1| 101|Caenorhabditis elegans Hypothetical ... 30 1.4
AL032654-2|CAA21718.1| 257|Caenorhabditis elegans Hypothetical ... 30 1.4
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 30 1.4
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 3.2
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 4.3
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 29 4.3
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 28 5.7
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 28 5.7
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 28 5.7
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z48241-1|CAA88285.1| 346|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical
protein Y53G8AR.5 protein.
Length = 287
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 325 VTLEVGLSSGYPDTSPEVALKNPRGLDDMILDTINTHIQDKLKNNLGQ-PIVFELIGIVR 501
V +E+ +S GYP SP V L NPRG+ + + IQ+ ++ N + PI+ ++
Sbjct: 47 VLIEMTVSEGYPAVSPTVTLSNPRGIGEPEFRELQRQIQEIIEQNSDEMPIICQIFQHCS 106
Query: 502 DHLTXKQ 522
D LT Q
Sbjct: 107 DFLTENQ 113
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +1
Query: 289 LTGDNIDQQYVCVTLEVGLSSGYPDTSPEVALKNPRGLDDMILDTINTHIQDKLKNNLGQ 468
L GD + + + V L V S YP P V L +P+GL + + T ++ G
Sbjct: 62 LNGDPLGKSKLSVILHVKCSEDYPQRKPAVDLLDPQGLSKEDVQNLLTILRQMADTWEGC 121
Query: 469 PIVFELIGIVRDHLT 513
++ EL VR+ LT
Sbjct: 122 VVIAELAHRVREFLT 136
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 35.5 bits (78), Expect = 0.037
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 539 CVICLYDFVDGDLFIKTQCYHYFHNHCL 622
C +CL F DG+ K +C H FH C+
Sbjct: 433 CTVCLSSFEDGESIQKLRCNHVFHPECI 460
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 34.7 bits (76), Expect = 0.065
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 515 RSNLPRGQCVICLYDFVDGDLFIKTQCYHYFHNHCL 622
R ++ +C IC+ DF G+ C H FH C+
Sbjct: 87 RGDMTSNECAICMIDFEPGERIRFLPCMHSFHQECV 122
>Z67734-3|CAA91529.2| 1050|Caenorhabditis elegans Hypothetical
protein B0198.3 protein.
Length = 1050
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 357 IARRQPHLQSHTYILLIDIIPRQRMDDRFNYVFWDISNAFYYHIFQ*NC 211
IA R P +Q H+Y ++D + D V+WD +++ + I C
Sbjct: 637 IAMRDPTMQEHSYASILDFHVDPDLSDEVFEVYWDSASSSEHSITSPTC 685
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 539 CVICLYDFVDGDLFIKTQCYHYFHNHCL 622
C ICL F G+ C H FH +C+
Sbjct: 247 CAICLESFASGEKLRHLPCRHVFHCNCI 274
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 530 RGQCVICLYDFVDGDLFIKTQCYHYFHNHCLANHFIAGKK 649
+G C IC D D C H +H+ C+ + +IA K+
Sbjct: 10 QGSCSICFEDLKQNDKISAIVCGHIYHHGCI-SQWIATKR 48
>AL032654-3|CAE54915.1| 101|Caenorhabditis elegans Hypothetical
protein Y52B11A.2b protein.
Length = 101
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +1
Query: 325 VTLEVGLSSGYPDTSPEVALKNPRGLDDMILDTINTHIQDKLKNNLGQPIVFELIGIVRD 504
+ + + L YP SP + + L + ++ + D N+G P++F I +V+D
Sbjct: 38 IGMTINLPEDYPSISPPIFELSGPYLRREQKEVLHNSLNDVYIENIGFPVIFNWISLVQD 97
Query: 505 HL 510
+
Sbjct: 98 FI 99
>AL032654-2|CAA21718.1| 257|Caenorhabditis elegans Hypothetical
protein Y52B11A.2a protein.
Length = 257
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +1
Query: 325 VTLEVGLSSGYPDTSPEVALKNPRGLDDMILDTINTHIQDKLKNNLGQPIVFELIGIVRD 504
+ + + L YP SP + + L + ++ + D N+G P++F I +V+D
Sbjct: 38 IGMTINLPEDYPSISPPIFELSGPYLRREQKEVLHNSLNDVYIENIGFPVIFNWISLVQD 97
Query: 505 HL 510
+
Sbjct: 98 FI 99
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 530 RGQCVICLYDFVDGDLFIKTQCYHYFHNHCLANHF 634
+G+C ICL D G + C +H C+ + F
Sbjct: 142 KGECSICLEDLEAGHKIARLPCLCIYHKQCIDDWF 176
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 3.2
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 648 NIITRNLRNYLLGNRCKC 701
N + R++ NY++ NRC+C
Sbjct: 163 NTVVRDVNNYIMSNRCEC 180
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 539 CVICLYDFVDGDLFIKTQCYHYFHNHCL 622
CVIC + + I+ C H FH HC+
Sbjct: 3517 CVICFTERLGAAPCIRLGCGHMFHFHCV 3544
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 518 SNLPRGQCVICLYDFVDGDLFIKTQCYHYFHNHCL 622
S+ + +CVICL ++ +G C H FH C+
Sbjct: 310 SHSAQERCVICLEEYEEGTELRVLFCGHEFHPKCV 344
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 325 VTLEVGLSSGYPDTSPEVALKNPRGLDDMILDTINTHIQDKLKNNLGQPIVFEL 486
VT+ VG S Y SP V+ +P L I ++ +T + DK+K +P+V E+
Sbjct: 34 VTVAVGTSVSYLKASPLVS--SPTSLVVDITESSSTLLYDKIKALPCEPVVTEV 85
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 325 VTLEVGLSSGYPDTSPEVALKNPRGLDDMILDTINTHIQDKLKNNLGQPIVFEL 486
VT+ VG S Y SP V+ +P L I ++ +T + DK+K +P+V E+
Sbjct: 34 VTVAVGTSVSYLKASPLVS--SPTSLVVDITESSSTLLYDKIKALPCEPVVTEV 85
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 518 SNLPRGQCVICLYDFVDGDLFIKTQCYHYFHNHC 619
S L +C ICL + + IK +C FH+ C
Sbjct: 435 SELDDTECAICLEEMYNFKETIKCECRRRFHSKC 468
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 539 CVICLYDFVDGDLFIKTQCYHYFHNHCLANHF 634
C+IC + + C H FH HCL + F
Sbjct: 292 CIICREEMTVDASPKRLPCSHVFHAHCLRSWF 323
>U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical
protein W06B4.3 protein.
Length = 962
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 527 PRGQCVICLYDFVDGDLFIKTQCYHYFHNHCLANHFIAGKKYYHEELEKLPT 682
P C C + G F C H+FH CL I+ EE+EK+ T
Sbjct: 838 PSDVCSHCARP-ISGRAFNVHSCRHFFHRECLEIAMISFLS--QEEVEKMKT 886
>Z48241-1|CAA88285.1| 346|Caenorhabditis elegans Hypothetical
protein C32A3.2 protein.
Length = 346
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 537 WPRGRLLRSQMITYNSNKFKHYWLSQIIFQFVLNMCV 427
W R+ S +ITY+ H+W+S+ + Q ++ +C+
Sbjct: 301 WAMNRMFHS-LITYSWRDIYHHWVSRNLVQLLI-LCI 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,059,661
Number of Sequences: 27780
Number of extensions: 335380
Number of successful extensions: 862
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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