Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5o17
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p pro...    31   0.91 
AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding ...    31   0.91 
AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,...    31   0.91 
AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,...    31   0.91 
AY118340-1|AAM48369.1|  638|Drosophila melanogaster LD44182p pro...    28   8.4  
AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p pro...    28   8.4  
AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-P...    28   8.4  
AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-P...    28   8.4  

>AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p
           protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -3

Query: 362 VFLNLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFG 183
           VF  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   
Sbjct: 358 VFAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSM 408

Query: 182 SSFCFDFHINFWTIH 138
           ++ CFD  +N+++ H
Sbjct: 409 NTSCFDRFVNWFSYH 423


>AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding
           protein 80 protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -3

Query: 362 VFLNLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFG 183
           VF  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   
Sbjct: 358 VFAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSM 408

Query: 182 SSFCFDFHINFWTIH 138
           ++ CFD  +N+++ H
Sbjct: 409 NTSCFDRFVNWFSYH 423


>AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,
           isoform B protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -3

Query: 362 VFLNLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFG 183
           VF  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   
Sbjct: 358 VFAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSM 408

Query: 182 SSFCFDFHINFWTIH 138
           ++ CFD  +N+++ H
Sbjct: 409 NTSCFDRFVNWFSYH 423


>AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,
           isoform A protein.
          Length = 800

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -3

Query: 362 VFLNLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFG 183
           VF  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   
Sbjct: 358 VFAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSM 408

Query: 182 SSFCFDFHINFWTIH 138
           ++ CFD  +N+++ H
Sbjct: 409 NTSCFDRFVNWFSYH 423


>AY118340-1|AAM48369.1|  638|Drosophila melanogaster LD44182p
           protein.
          Length = 638

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
 Frame = +2

Query: 23  IRKCLINSP*-VQY*RY---GVPIFTSNS-YNSFRNIFCDK 130
           + +C +N P  +++ RY   G+P FT    Y++F+N+FC K
Sbjct: 434 LNQCGLNKPEQIKFARYLGQGLPTFTLFCIYSNFKNLFCTK 474


>AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p
           protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
 Frame = +2

Query: 23  IRKCLINSP*-VQY*RY---GVPIFTSNS-YNSFRNIFCDK 130
           + +C +N P  +++ RY   G+P FT    Y++F+N+FC K
Sbjct: 130 LNQCGLNKPEQIKFARYLGQGLPTFTLFCIYSNFKNLFCTK 170


>AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-PB,
           isoform B protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
 Frame = +2

Query: 23  IRKCLINSP*-VQY*RY---GVPIFTSNS-YNSFRNIFCDK 130
           + +C +N P  +++ RY   G+P FT    Y++F+N+FC K
Sbjct: 434 LNQCGLNKPEQIKFARYLGQGLPTFTLFCIYSNFKNLFCTK 474


>AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-PA,
           isoform A protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
 Frame = +2

Query: 23  IRKCLINSP*-VQY*RY---GVPIFTSNS-YNSFRNIFCDK 130
           + +C +N P  +++ RY   G+P FT    Y++F+N+FC K
Sbjct: 434 LNQCGLNKPEQIKFARYLGQGLPTFTLFCIYSNFKNLFCTK 474


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,369,745
Number of Sequences: 53049
Number of extensions: 309675
Number of successful extensions: 758
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)