Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5o17
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    26   0.26 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 253 RSHHGVHISWRQISIRNGPYEQ 318
           +SHHG+HI+    S+++G  +Q
Sbjct: 808 QSHHGLHINSSPSSVQSGQQQQ 829


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 268 VHISWRQISIRNGPYEQ*RAYGE 336
           VHIS   +S  NG +E   A+GE
Sbjct: 408 VHISNATLSFLNGEFEVEPAHGE 430


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 487 IYKSYQYNFPDNNRSILSSPK 425
           IY++  + F D  R +L  PK
Sbjct: 188 IYRAAYFGFYDTARGMLPDPK 208


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 487 IYKSYQYNFPDNNRSILSSPK 425
           IY++  + F D  R +L  PK
Sbjct: 188 IYRAAYFGFYDTARGMLPDPK 208


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 363 VVLMLR*FKSVKLVNFN 413
           ++ +L  FKS  L+NFN
Sbjct: 134 IIFLLIRFKSFSLLNFN 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,654
Number of Sequences: 438
Number of extensions: 2155
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)