Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5o05
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00047-3|AAA50689.2|  225|Caenorhabditis elegans Hypothetical pr...    99   3e-21
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr...    31   0.84 
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z81523-8|CAB04245.1|  290|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U00047-3|AAA50689.2|  225|Caenorhabditis elegans Hypothetical
           protein ZK418.5 protein.
          Length = 225

 Score = 99.1 bits (236), Expect = 3e-21
 Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 1/154 (0%)
 Frame = +3

Query: 270 VVPLKEILKSTVDFADLLGIYFAL-NSVPGKGHAKILTSAIGWASAELVVTRTVLLWVGA 446
           +VP  E LKS+ D  D++G++  + N + GKG  + +   +GW  A  V  R VLLWVGA
Sbjct: 67  IVP--EFLKSSADIIDVIGLHLLMTNFLAGKGEVRFVVGGLGWGFAHSVAHRLVLLWVGA 124

Query: 447 RGSEFDWRYVRSCAESNVALIQHAATATLVWLWTRSDLPKKHSPIVVSLLALTPYRALIE 626
           RG+ F WR+V++  +S+  L+   + A L W+ TR+  P K   +V  +LA+  +   + 
Sbjct: 125 RGTAFTWRWVQTSLDSSADLLVIVSLACLTWMITRT--PNKF--LVSPILAMCVFSTFVY 180

Query: 627 EAIGSIFHLCAWALVAVRAIHASAVGLSALATYA 728
           + +   F L  W+L+A R  ++ A  +  +  Y+
Sbjct: 181 QTVQHTFSLYGWSLLAFRFAYSIATAILTVVVYS 214



 Score = 84.6 bits (200), Expect = 6e-17
 Identities = 36/62 (58%), Positives = 46/62 (74%)
 Frame = +2

Query: 86  MTLYHFGNCLALIYAPYHMAYKYSGISEYASFSKCVYAGGLYIFTQLCKMLLLATFFPDS 265
           M+ +HF NC AL +APY + YKYSGI+EY+S  KC  A G Y+ TQL K+L++ATFFP  
Sbjct: 1   MSFFHFINCFALAFAPYFIVYKYSGINEYSSIWKCATASGGYLLTQLAKLLIIATFFPAL 60

Query: 266 DS 271
           DS
Sbjct: 61  DS 62


>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
           protein F54F2.1 protein.
          Length = 1226

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -1

Query: 490 SAQERT*RQSNSEPLAPTQSNTVRVTTNSALAHPIADVRILAWPLPGTEFNAKYMPSRSA 311
           S+  R    S+  PLAP   N    ++N   AH +AD ++  + +P    N   +  RS 
Sbjct: 751 SSVVRVTASSDKPPLAPISINAHVNSSNDEEAHTVADNKV-TFTIPVDFKNQLSLNGRSN 809

Query: 310 KSTVDFSIS 284
              VDFS++
Sbjct: 810 PEQVDFSMT 818


>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
           protein Y48G1C.5 protein.
          Length = 1161

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 155 NICKPYDKVHILRLSNSRSDIGSFCTLFKCLLTN 54
           N+ K  +K  I ++++SRSDI  F  +  CL +N
Sbjct: 483 NLLKTLEKRAIEKINDSRSDIAQFLDVLSCLQSN 516


>Z81523-8|CAB04245.1|  290|Caenorhabditis elegans Hypothetical
           protein F32H2.8 protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 204 DYIFSLNFAKCYC*QHFFRTLIV 272
           +Y  SLN  +CYC +H +R  IV
Sbjct: 59  EYSISLNTVRCYCQKHNYRLEIV 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,622,614
Number of Sequences: 27780
Number of extensions: 361197
Number of successful extensions: 870
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)