BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5n15
(715 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro... 36 0.072
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P... 36 0.072
U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic ini... 29 4.7
BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p pro... 29 4.7
AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha k... 29 4.7
AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA... 29 4.7
>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
Length = 1654
Score = 35.5 bits (78), Expect = 0.072
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 149 LPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 265
+P Q AQL TTVP+P + Q+P P N AVQ +Q
Sbjct: 1497 VPRRQKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534
>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
protein.
Length = 1654
Score = 35.5 bits (78), Expect = 0.072
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 149 LPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 265
+P Q AQL TTVP+P + Q+P P N AVQ +Q
Sbjct: 1497 VPRRQKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534
>U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic
initiation factor eIF-2 alpha kinase protein.
Length = 1589
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 678 QGSV*FHQQSLVHQMLLPVQLVLCVWGLPVDLASSDFGVVASSFLA 541
+G HQQ ++H+ L PV + L + DFG+ +SFLA
Sbjct: 730 EGLAHIHQQGIIHRDLKPVNIFL---DSHDQIKIGDFGLATTSFLA 772
>BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p
protein.
Length = 1312
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 678 QGSV*FHQQSLVHQMLLPVQLVLCVWGLPVDLASSDFGVVASSFLA 541
+G HQQ ++H+ L PV + L + DFG+ +SFLA
Sbjct: 453 EGLAHIHQQGIIHRDLKPVNIFL---DSHDQIKIGDFGLATTSFLA 495
>AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha
kinase protein.
Length = 1589
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 678 QGSV*FHQQSLVHQMLLPVQLVLCVWGLPVDLASSDFGVVASSFLA 541
+G HQQ ++H+ L PV + L + DFG+ +SFLA
Sbjct: 730 EGLAHIHQQGIIHRDLKPVNIFL---DSHDQIKIGDFGLATTSFLA 772
>AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA
protein.
Length = 1589
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 678 QGSV*FHQQSLVHQMLLPVQLVLCVWGLPVDLASSDFGVVASSFLA 541
+G HQQ ++H+ L PV + L + DFG+ +SFLA
Sbjct: 730 EGLAHIHQQGIIHRDLKPVNIFL---DSHDQIKIGDFGLATTSFLA 772
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,193,644
Number of Sequences: 53049
Number of extensions: 496728
Number of successful extensions: 1395
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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