Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5n05
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 54 6e-08
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 31 0.36
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 30 1.1
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 30 1.1
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 1.9
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 1.9
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 3.4
U64846-11|AAG24118.2| 231|Caenorhabditis elegans Serpentine rec... 28 4.5
U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine rec... 28 4.5
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 28 4.5
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 27 7.8
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 27 7.8
U41107-1|AAC71166.1| 220|Caenorhabditis elegans Hypothetical pr... 27 7.8
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 27 7.8
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 27 7.8
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 7.8
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = -3
Query: 492 FSNSIVFQGRVKQLGVADVGGGCLRVLHAWSRVRPAIAQINLASCCVVPPALHAFCRAND 313
+ +V + +GV+D L+ + V+P+I + L CC VPP L A ND
Sbjct: 148 YMEKLVETSEIASIGVSDFSARQLKTIIDHFDVKPSINHVRLDGCCQVPPELQALANDND 207
Query: 312 VQLLTHADP 286
VQLL H DP
Sbjct: 208 VQLLVHNDP 216
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -2
Query: 424 PEGAARVVPRPSRHRADQPGLVLRGPAGPARVLPRQRRPAAHTRRP--AEYVIASLGCFQ 251
P+ +V + + + QP + P P++ LPRQ+ P RP A+ V+ G Q
Sbjct: 529 PQQVQQVHQQTPQQQVQQPHQPNQQPHIPSQQLPRQQAPQPAQNRPSAAQQVVFQQGSVQ 588
Query: 250 STLDSFRP 227
+T RP
Sbjct: 589 ATTAPQRP 596
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +2
Query: 233 KRIQRRLKAA*ACDHVLGGSACVSSWTSLARQNACRAGGTTQHEARLICAMAGRTRDHAC 412
KR +RR A + G +A + WTS + N CR + H + + + + + +
Sbjct: 31 KRNRRRTMAIHGVETEPGQTAASTGWTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTST 90
Query: 413 STLRQPPPTSAT 448
S+L +S T
Sbjct: 91 SSLHPATKSSTT 102
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +2
Query: 233 KRIQRRLKAA*ACDHVLGGSACVSSWTSLARQNACRAGGTTQHEARLICAMAGRTRDHAC 412
KR +RR A + G +A + WTS + N CR + H + + + + + +
Sbjct: 31 KRNRRRTMAIHGVETEPGQTAASTGWTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTST 90
Query: 413 STLRQPPPTSAT 448
S+L +S T
Sbjct: 91 SSLHPATKSSTT 102
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 386 PSRRSTWPRAAWSRRPCTRSAAPTTSSCSHTPTRRVRDRKL-RLL 255
PS ST P + P T S+ PTTSS VR R+L RLL
Sbjct: 563 PSTSSTAPSTS---SPVTASSTPTTSSTRTPEAEEVRQRRLARLL 604
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 269 CDHVLGGSACVSSWTSLARQNACRAG 346
CDHV G C + WT Q +C G
Sbjct: 1050 CDHVTGECRCPAGWTGPDCQTSCPLG 1075
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 269 CDHVLGGSACVSSWTSLARQNACRAG 346
CDHV G C + WT Q +C G
Sbjct: 1050 CDHVTGECRCPAGWTGPDCQTSCPLG 1075
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -3
Query: 186 CTADGVV-SRCPCRPHVLHTHRYQRVPIGRFSSFLYYY--QAPSC 61
CT DG+V CP + + + + G SS+ YYY QA C
Sbjct: 679 CTFDGLVYGCCPSKAYTCSLQVNKGIGCGSGSSYRYYYNNQAKEC 723
>U64846-11|AAG24118.2| 231|Caenorhabditis elegans Serpentine
receptor, class h protein194, isoform a protein.
Length = 231
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 84 YYYQAPSCLFTKSLNIHFCLNVISI 10
Y Y AP +FT+ + HF ++VI +
Sbjct: 70 YIYNAPVFVFTEDITYHFIISVIFV 94
>U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein194, isoform b protein.
Length = 341
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 84 YYYQAPSCLFTKSLNIHFCLNVISI 10
Y Y AP +FT+ + HF ++VI +
Sbjct: 180 YIYNAPVFVFTEDITYHFIISVIFV 204
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 424 PEGAARVVPRPSRHRADQPGLVLRGPAGPARVLPRQRRPAA 302
P+ A +V RP HR P + R A AR P +P+A
Sbjct: 1416 PQQQAHLVQRPQAHRLSAPAMQQRPQAAAAR-QPETPQPSA 1455
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 164 HAARADHMFFIRIVINVCLLGGFPRFYIIIRLQVAY 57
HA +AD MF R+V VC L F F + ++Y
Sbjct: 513 HALQADWMFASRVVDRVCFL-AFSAFLFMCTAIISY 547
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -3
Query: 468 GRVKQLGVADVGGGCLRVLHAWSRVRPAIAQINLASCCVVPPALHAFCRANDVQLLTHA 292
GRV+ +GV++ L + ++++RP + Q + P L FC N++ + +++
Sbjct: 154 GRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQP-YLTRPTLKKFCDLNNIVVQSYS 211
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 471 QGRVKQLGVADVGGGCLRVLHAWSRVRPAIAQINLASCCVVPP--ALHAFCRANDVQLLT 298
+G++K LGV++ L+ L+ + V+PA Q+ C + P L A C+ V +
Sbjct: 154 EGKLKALGVSNFSCNQLQALYDAAEVKPANQQV---ECHIYWPQQELRALCKKLGVTVTA 210
Query: 297 HA 292
+A
Sbjct: 211 YA 212
>U41107-1|AAC71166.1| 220|Caenorhabditis elegans Hypothetical
protein F55C12.4 protein.
Length = 220
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 289 VGVCEQLDVVGAAERVQGR---RDHAARGQVDLRDGGTD 396
+ VC+Q D VG +GR R A G+V GG D
Sbjct: 174 LAVCQQHDTVGGVSMPRGREQPRRRQAAGKVKTTTGGDD 212
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 164 HAARADHMFFIRIVINVCLLGGFPRFYIIIRLQVAY 57
HA +AD MF R+V VC L F F + ++Y
Sbjct: 513 HALQADWMFASRVVDRVCFL-AFSAFLFMCTAIISY 547
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 211 ETPVLQSIVH--CRRCSITLPVPTTCSSYASLSTCAYWAVFLVSILLSGSKLPI 56
E P++ + H CR C++ P+T S +S S+ ++S +LS + PI
Sbjct: 15 EDPIILTCGHSLCRMCALKAHQPSTSSGSSSTSSPRPSTPGILSQILSSASSPI 68
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 296 CVSSWTSLARQNACRAGGTTQHEARLICA--MAGRTRDHACSTLRQPPPTSATPSCFTRP 469
C S+ TS+ ++ + TQ L + T +T PPPT+ TP+ +P
Sbjct: 114 CKSASTSVVNDSSNTSATATQTTTPLTTTFTLENATTKEKVTTPTPPPPTTTTPTTTLKP 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,124,892
Number of Sequences: 27780
Number of extensions: 262455
Number of successful extensions: 810
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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