Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5n05
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 156 GSVILHRRQCTMDWS 200
           GSVIL   +C+M W+
Sbjct: 202 GSVILDTARCSMKWT 216


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 66  LEPDNNIETRKTAQ*AHVDNDAYEEHVVGTGSV 164
           ++ D +  TR+ A+  HV +   E H+   G V
Sbjct: 78  IDSDRHSTTREIAEKLHVSHTCIENHLKQLGYV 110


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -2

Query: 400 PRPSRHRADQPGLVLRGPAGPARVLPRQRRPAAHTRRPAEYVIAS 266
           P P+   A    +  R P G   +L       + TR PA  VI +
Sbjct: 745 PSPAEQCASTTTITARSPQGSQGLLQCATSNYSTTRWPATSVITT 789


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 400  GPRVQHPQAAATHVR 444
            GP V HP  A+ H R
Sbjct: 1760 GPPVGHPTNASAHSR 1774


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -2

Query: 178 RRCSITLPVPTTCSSYASLSTCAYW 104
           RR ++ + +   CSS  S     +W
Sbjct: 161 RRAAVLIAIVWICSSAISFPAIVWW 185


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 311 SSCSHTPTRRVRDRKLRLLSVYAGF 237
           S C   P   V DR+L L+ +  GF
Sbjct: 290 SFCKAFPWHFVVDRQLELVQLGVGF 314


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,483
Number of Sequences: 438
Number of extensions: 3094
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)