Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5n02
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   3.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   3.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 355 FASNASDRPGLSSDCECNNSYFCSVTYN 272
           F  N    P L+SDC+ N +   + T+N
Sbjct: 15  FYQNYKTNPFLASDCDKNQNTEQNYTHN 42


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 355 FASNASDRPGLSSDCECNNSYFCSVTYN 272
           F  N    P L+SDC+ N +   + T+N
Sbjct: 15  FYQNYKTNPFLASDCDKNQNTEQNYTHN 42


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 355 FASNASDRPGLSSDCECNNSYFCSVTYN 272
           F  N    P L+SDC+ N +   + T+N
Sbjct: 15  FYQNYKTNPFLASDCDKNQNTEHNYTHN 42


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 458 CDVRQVAPAPPP 423
           CDV    P PPP
Sbjct: 207 CDVPSTIPPPPP 218


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 364 TSARRCRPALPATIPVSVWRG 426
           + AR+  PALP  +PV +  G
Sbjct: 388 SKARQFLPALPGYVPVYIRPG 408


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 364 TSARRCRPALPATIPVSVWRG 426
           + AR+  PALP  +PV +  G
Sbjct: 213 SKARQFLPALPGYVPVYIRPG 233


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 69  KVYIFSCF*LTINMVCVFTTC 131
           ++Y F C  +T N+  +F  C
Sbjct: 55  RIYYFYCVSITFNVHLLFLLC 75


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 514 CVVCGARYKHKHVRFGRER 458
           C VC   + +KHV    ER
Sbjct: 137 CEVCNRSFGYKHVLQNHER 155


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 331 PGLSSDCECNNSYFC 287
           P ++ D  C N Y C
Sbjct: 364 PSINDDGTCGNGYVC 378


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 331 PGLSSDCECNNSYFC 287
           P ++ D  C N Y C
Sbjct: 365 PSINDDGTCGNGYVC 379


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 334 RPGLSSDCECNNSYFCSVTYN 272
           RPG  +DC  N S    +  N
Sbjct: 204 RPGFDNDCNKNTSTSKEIALN 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,327
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)