BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5m23
(702 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 4.0
AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein. 23 9.3
AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein. 23 9.3
AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein. 23 9.3
AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein. 23 9.3
AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein. 23 9.3
AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 23 9.3
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 24.2 bits (50), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 225 GSIRLLVSDKKENKMVDPRRVVSYEDVLKVIHQPEKV--LIDVRNP 356
G+IR V DK+ NK+ +V +YE L E LI+V P
Sbjct: 1847 GAIRATVEDKRGNKVAKYWQVGNYEHRLTTYTYSETYGHLIEVLPP 1892
>AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 679 YHNMKIYIIISILDRNLRFHYFCVLDHSFQLPKYVFDLE*PNFNAMSNASVDL 521
+++ K+Y+ S L + FHY + +S +V D PN +S ++ L
Sbjct: 186 FNDEKLYLDKSGLLKEADFHYDVFVSYSNADRSWVLDHLLPNMEGVSQINLCL 238
>AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 679 YHNMKIYIIISILDRNLRFHYFCVLDHSFQLPKYVFDLE*PNFNAMSNASVDL 521
+++ K+Y+ S L + FHY + +S +V D PN +S ++ L
Sbjct: 186 FNDEKLYLDKSGLLKEADFHYDVFVSYSNADRSWVLDHLLPNMEGVSQINLCL 238
>AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 679 YHNMKIYIIISILDRNLRFHYFCVLDHSFQLPKYVFDLE*PNFNAMSNASVDL 521
+++ K+Y+ S L + FHY + +S +V D PN +S ++ L
Sbjct: 186 FNDEKLYLDKSGLLKEADFHYDVFVSYSNADRSWVLDHLLPNMEGVSQINLCL 238
>AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 679 YHNMKIYIIISILDRNLRFHYFCVLDHSFQLPKYVFDLE*PNFNAMSNASVDL 521
+++ K+Y+ S L + FHY + +S +V D PN +S ++ L
Sbjct: 186 FNDEKLYLDKSGLLKEADFHYDVFVSYSNADRSWVLDHLLPNMEGVSQINLCL 238
>AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 679 YHNMKIYIIISILDRNLRFHYFCVLDHSFQLPKYVFDLE*PNFNAMSNASVDL 521
+++ K+Y+ S L + FHY + +S +V D PN +S ++ L
Sbjct: 186 FNDEKLYLDKSGLLKEADFHYDVFVSYSNADRSWVLDHLLPNMEGVSQINLCL 238
>AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein.
Length = 576
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 679 YHNMKIYIIISILDRNLRFHYFCVLDHSFQLPKYVFDLE*PNFNAMSNASVDL 521
+++ K+Y+ S L + FHY + +S +V D PN +S ++ L
Sbjct: 413 FNDEKLYLDKSGLLKEADFHYDVFVSYSNADRSWVLDHLLPNMEGVSQINLCL 465
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,632
Number of Sequences: 2352
Number of extensions: 13858
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -