Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m23
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81592-13|CAB76412.2|  421|Caenorhabditis elegans Hypothetical p...    44   1e-04
Z78016-9|CAB76723.2|  421|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AC090999-25|AAK26157.2|  921|Caenorhabditis elegans Hypothetical...    33   0.20 
Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AF101318-6|AAC69348.2|  946|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z72515-4|CAA96685.1|  288|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>Z81592-13|CAB76412.2|  421|Caenorhabditis elegans Hypothetical
           protein R186.6 protein.
          Length = 421

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
 Frame = +3

Query: 285 VVSYEDVLKVIHQPEKVLIDVRNPDEVNTT------GKIPSSINIPLNSVQEVLVSM--S 440
           +++Y+DVL         ++D +  DE   T      G I  + NIP+++V +  V     
Sbjct: 292 IITYDDVLLNSEIDNFDVVDAQTKDEFLGTAQGALYGHIKGARNIPVDAVYDWAVGQWKD 351

Query: 441 NEEFKKQYQRNKPSSTDELIFYCQSGRRSTEALDIALKLGYSKSKTYLGSWNEW 602
            +  K  +  N  S    +I YC +  RS        + GY+  K Y G W EW
Sbjct: 352 ADHLKGLFNNNALSLRKPVIIYCSTSLRSAMVWWALTRSGYN-GKIYFGGWPEW 404


>Z78016-9|CAB76723.2|  421|Caenorhabditis elegans Hypothetical
           protein R186.6 protein.
          Length = 421

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
 Frame = +3

Query: 285 VVSYEDVLKVIHQPEKVLIDVRNPDEVNTT------GKIPSSINIPLNSVQEVLVSM--S 440
           +++Y+DVL         ++D +  DE   T      G I  + NIP+++V +  V     
Sbjct: 292 IITYDDVLLNSEIDNFDVVDAQTKDEFLGTAQGALYGHIKGARNIPVDAVYDWAVGQWKD 351

Query: 441 NEEFKKQYQRNKPSSTDELIFYCQSGRRSTEALDIALKLGYSKSKTYLGSWNEW 602
            +  K  +  N  S    +I YC +  RS        + GY+  K Y G W EW
Sbjct: 352 ADHLKGLFNNNALSLRKPVIIYCSTSLRSAMVWWALTRSGYN-GKIYFGGWPEW 404


>AC090999-25|AAK26157.2|  921|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.18 protein.
          Length = 921

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 24/90 (26%), Positives = 40/90 (44%)
 Frame = +3

Query: 201 YNNNLHLLGSIRLLVSDKKENKMVDPRRVVSYEDVLKVIHQPEKVLIDVRNPDEVNTTGK 380
           ++ NLH    I+    D  +  +  P   +SY +VL  I  P ++  D  NP  +  T K
Sbjct: 228 FDGNLHKFEEIQKATEDVWDTVLHKPLGFISYSEVLSPISTPIQIYQDF-NPISMEFTAK 286

Query: 381 IPSSINIPLNSVQEVLVSMSNEEFKKQYQR 470
           +   ++    +V E     S  E +KQ Q+
Sbjct: 287 LSKELSSFCEAVDEF---YSRIETQKQEQK 313


>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
 Frame = +3

Query: 336 LIDVRNPDEVNTTGKIPSSINIP----LNSVQEVLVSMSNEEFKKQYQRNKPSSTDELIF 503
           L +V NPDEV   G  P  I +     L S Q+     S+++ K  YQ  K     E+  
Sbjct: 71  LFNVTNPDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEV-- 128

Query: 504 YCQSGRRSTEALDIALKLGYSKSKTYLGSWNEWSRTQK 617
              +G    + +     +      T  G  +E+S T K
Sbjct: 129 DNDAGYNYNDKIMFPNSIAEGAVSTVFGPQSEFSPTAK 166


>AF101318-6|AAC69348.2|  946|Caenorhabditis elegans Hypothetical
            protein Y73C8C.8 protein.
          Length = 946

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/98 (22%), Positives = 46/98 (46%)
 Frame = +3

Query: 207  NNLHLLGSIRLLVSDKKENKMVDPRRVVSYEDVLKVIHQPEKVLIDVRNPDEVNTTGKIP 386
            N ++ + S  + VS  +ENK++  R  + +E  ++   +  +  I +   +E  ++ +IP
Sbjct: 784  NKINKMTSKLIQVSKNRENKIISKREFIYFERQIRGYTKEVENRIKIIRSNEQISSDQIP 843

Query: 387  SSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSSTDELI 500
               N P  S  E L     + +K  ++ N P    +L+
Sbjct: 844  ELRNFPTFS-DEFL-----KAYKDTFKENAPLICAQLL 875


>Z72515-4|CAA96685.1|  288|Caenorhabditis elegans Hypothetical
           protein T11A5.5 protein.
          Length = 288

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -3

Query: 424 TS*TLFSGILMLEGIFPVVFTSSGLR 347
           +S T+FS IL+L  IFP+VFTS  LR
Sbjct: 28  SSITVFSVILILT-IFPLVFTSGHLR 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,916,891
Number of Sequences: 27780
Number of extensions: 312445
Number of successful extensions: 748
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)