Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5m16
(437 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 40 2e-04
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 27 0.96
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 27 1.7
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 27 1.7
SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|c... 26 2.2
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 26 2.9
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 26 2.9
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 25 3.9
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 25 5.1
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 25 6.7
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 25 6.7
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom... 24 8.9
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 39.5 bits (88), Expect = 2e-04
Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Frame = +3
Query: 24 CKKREKTAS-NLNESIKAKLKESLTQNTVVTGDTASNQISRTR--QSNV---KKEGFYNF 185
CK+ E++ + +NE L+E L++ D++++Q +RTR ++N+ +K GF ++
Sbjct: 37 CKESEESCTYGVNEQAVQLLEEPLSRPITRETDSSAHQETRTRLEENNLPKTQKFGFVDW 96
Query: 186 KSMLLRSVESQGVVQQ 233
K++L S E QG+VQ+
Sbjct: 97 KTILKSSAEFQGIVQR 112
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 0.96
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 278 NQKVISIYQPRTNATGKWICRDPFSVNPNEIR 373
N+ ++ Y T A G + R PF++NP + R
Sbjct: 100 NEPLVGNYYISTEALGDGLNRSPFTINPEKRR 131
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 1.7
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 18 KECKKREKTASNLNES--IKAKLKESLTQNTVVTGDTASNQISRTRQSNVKKEGFYNF 185
K+ R + AS+L E+ + K ++ T T + ++ + R RQ+N+K + NF
Sbjct: 750 KKENNRIRNASSLMENPRVSTKTFDNFTLTHDSTINVKADTVKRARQNNIKNKDDVNF 807
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 1.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 185 QEHVVAKRGVARRRPTEESEQTHEKTCEK 271
QEH + G++R TEES +THE EK
Sbjct: 413 QEHT-DELGMSRANTTEESAETHEVIEEK 440
>SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 708
Score = 26.2 bits (55), Expect = 2.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 108 VTGDTASNQISRTRQSNVKKEGFYNFKSMLLRSVES 215
+ T+ + + RQ + KEG Y F +M +R V +
Sbjct: 230 ILNPTSDSDVDLIRQYFIPKEGTYTFSNMHIRYVSA 265
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 25.8 bits (54), Expect = 2.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 431 F*NSMNGLFKHSNVGNKFTSVSR*DSLKRDLCRSIF 324
F +S+ G+F+ N+ +FTS R +L R ++
Sbjct: 461 FTHSLEGMFRDVNISKEFTSSFRHSKAAHNLHRDLY 496
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.8 bits (54), Expect = 2.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 260 TCEKCQNQKVISIYQPRTNATGK 328
+C+ C N KV I+ R N GK
Sbjct: 40 SCQACSNNKVECIWPDRPNMRGK 62
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 25.4 bits (53), Expect = 3.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 242 EQTHEKTCEKCQNQKVISIYQPRTNAT 322
E E++ E+C+ Q+ +S QP T A+
Sbjct: 279 ENGEERSMEECRAQRYLSSIQPNTAAS 305
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 18 KECKKREKTASNLNESIKAKLKESLTQNT 104
+E K+R TA++ IK KLKE + T
Sbjct: 267 EEDKRRRNTAASARFRIKKKLKEQQLERT 295
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 24.6 bits (51), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 425 NSMNGLFKHSNVGNKFTSVSR*DSLK 348
NS+N L KH +GN+ R +S K
Sbjct: 839 NSVNKLMKHVMMGNEMMKYPRSESFK 864
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 24.6 bits (51), Expect = 6.7
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +3
Query: 18 KECKKREKTASNLNESIKAKLKESLTQNTVVTGDTASNQISRTRQSNVKKEGFYNFKSML 197
+E +KRE+ +SNL+E K +E++ ++ TG ++R KE +
Sbjct: 132 EERRKREEKSSNLDEEELRKSRETVYRD--ATGRRIDLVLARKEAKRKLKE---KEEEAR 186
Query: 198 LRSVESQGVVQ 230
+ + QGVVQ
Sbjct: 187 RQKEQQQGVVQ 197
>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 24.2 bits (50), Expect = 8.9
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -2
Query: 208 TLRNNM--LLKL*NPS-FFTLLCLVL 140
TL N+ +L L PS FFTLLCL+L
Sbjct: 185 TLYENIHNVLPLITPSYFFTLLCLIL 210
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,599,322
Number of Sequences: 5004
Number of extensions: 27419
Number of successful extensions: 78
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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