Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m11
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058348-1|AAL13577.1|  728|Drosophila melanogaster GH12158p pro...   140   2e-33
AE014297-1704|AAF54962.2|  728|Drosophila melanogaster CG10841-P...   140   2e-33
BT023526-1|AAY84926.1|  301|Drosophila melanogaster IP09951p pro...    29   6.3  
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P...    29   6.3  

>AY058348-1|AAL13577.1|  728|Drosophila melanogaster GH12158p
           protein.
          Length = 728

 Score =  140 bits (339), Expect = 2e-33
 Identities = 74/195 (37%), Positives = 113/195 (57%), Gaps = 1/195 (0%)
 Frame = +2

Query: 89  VRLADVWKTCNKIRAAAFRVGLNLWDWYRPLDPEGNSLISESKFVSILAGPLRSVIGLSD 268
           + L  +W+ C KI+ A FR   ++    +  DP  +  +SE  F ++L G  R V GLS+
Sbjct: 15  MELNQIWRGCRKIQGAIFRYNFDICADLKQHDPCCSGFVSEPIFTAVL-GKYRKVAGLSE 73

Query: 269 AEISQLADYFRAQDGRILYHQLCQVVHGEDSNARDKISADCFLXXXXXXXXXXXHKLDQW 448
           +E+  + DYF+ +DGR+ Y Q C+VV  E  +   K      L            + +  
Sbjct: 74  SELRDVTDYFQIRDGRVAYRQFCKVVCSETLHKTAKSDLATGLEWNDPWHVNVVPQPEDR 133

Query: 449 QIRRLCCLLATIASR-NLPLKPYFQDYEMVAKNDGRITFAHFARILNFIGVLVSPEDFNL 625
             RRLC +L  IA   N+PL PYFQDYE++A+N G +T AHF+R+L+F+ + +S  DF L
Sbjct: 134 --RRLCLILLKIAQLCNIPLMPYFQDYELIAQNVGVVTVAHFSRVLHFMKIPLSESDFLL 191

Query: 626 LVRRFIKDSYTLDYV 670
           L+RR++KD Y ++YV
Sbjct: 192 LLRRYMKDGYLVNYV 206



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 179 LDPEGNSLISESKFVSILAGPLRSVIGLSDAEISQLADYFRAQDGRIL 322
           LDPE    +SE   V IL    R  +  S A I  + DY R ++G IL
Sbjct: 503 LDPED---VSEEVIVRILTNAKRQAVVKSVAVIEFMKDYDRHREGEIL 547


>AE014297-1704|AAF54962.2|  728|Drosophila melanogaster CG10841-PA
           protein.
          Length = 728

 Score =  140 bits (339), Expect = 2e-33
 Identities = 74/195 (37%), Positives = 113/195 (57%), Gaps = 1/195 (0%)
 Frame = +2

Query: 89  VRLADVWKTCNKIRAAAFRVGLNLWDWYRPLDPEGNSLISESKFVSILAGPLRSVIGLSD 268
           + L  +W+ C KI+ A FR   ++    +  DP  +  +SE  F ++L G  R V GLS+
Sbjct: 15  MELNQIWRGCRKIQGAIFRYNFDICADLKQHDPCCSGFVSEPIFTAVL-GKYRKVAGLSE 73

Query: 269 AEISQLADYFRAQDGRILYHQLCQVVHGEDSNARDKISADCFLXXXXXXXXXXXHKLDQW 448
           +E+  + DYF+ +DGR+ Y Q C+VV  E  +   K      L            + +  
Sbjct: 74  SELRDVTDYFQIRDGRVAYRQFCKVVCSETLHKTAKSDLATGLEWNDPWHVNVVPQPEDR 133

Query: 449 QIRRLCCLLATIASR-NLPLKPYFQDYEMVAKNDGRITFAHFARILNFIGVLVSPEDFNL 625
             RRLC +L  IA   N+PL PYFQDYE++A+N G +T AHF+R+L+F+ + +S  DF L
Sbjct: 134 --RRLCLILLKIAQLCNIPLMPYFQDYELIAQNVGVVTVAHFSRVLHFMKIPLSESDFLL 191

Query: 626 LVRRFIKDSYTLDYV 670
           L+RR++KD Y ++YV
Sbjct: 192 LLRRYMKDGYLVNYV 206



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 179 LDPEGNSLISESKFVSILAGPLRSVIGLSDAEISQLADYFRAQDGRIL 322
           LDPE    +SE   V IL    R  +  S A I  + DY R ++G IL
Sbjct: 503 LDPED---VSEEVIVRILTNAKRQAVVKSVAVIEFMKDYDRHREGEIL 547


>BT023526-1|AAY84926.1|  301|Drosophila melanogaster IP09951p
           protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 473 LATIASRNLPLKPYFQDYEMVAKNDG 550
           LA   S   P K  FQD+  VAKNDG
Sbjct: 33  LAARGSHAQPYKSVFQDFVTVAKNDG 58


>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
            protein.
          Length = 1884

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +2

Query: 89   VRLADVW--KTCNKIRAAAFRVGLNLWDWYRPLDPE-GNSLISESKFV 223
            VR AD+   ++  K+RA  F VG    DW R +DP  G+  ++++KF+
Sbjct: 1833 VRWADIEEKRSQKKMRAIGFVVGQT--DWNRMMDPNAGSRALNKTKFI 1878


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,285,654
Number of Sequences: 53049
Number of extensions: 647953
Number of successful extensions: 2104
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)