Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m10
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    26   0.23 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.0  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 255 KAYAQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCY 392
           KAY    L++  E L  +   PEL P    + A   Y+ ++YQ  Y
Sbjct: 416 KAYGAGLLSAYGELLHALSDKPELRPFEPAVTAVQPYQDQEYQPIY 461


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 551 PELYANSYVFFIKLRQ 504
           P+ Y NSY+F + L Q
Sbjct: 39  PQNYINSYLFSLSLAQ 54


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 349 LNSFKAGVNSGALSTVCSASLGELR 275
           +NSF     SG L  +C  ++ + R
Sbjct: 241 VNSFSCSCPSGTLGYICEINVDDCR 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,229
Number of Sequences: 336
Number of extensions: 3008
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)