Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m10
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         27   0.50 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   2.7  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   3.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.2  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    23   6.2  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    23   8.2  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 580 YTSPALPKCCPSCMPIRMCFSSNCGSSDVG 491
           +T+PA+P    SC P+    S++C SS  G
Sbjct: 228 HTAPAIP--VSSCSPLSTASSASCSSSAAG 255


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = -2

Query: 459 PCWLSSHLH-THQWCSSV 409
           PCW+  HLH   QW   V
Sbjct: 442 PCWIEIHLHGPLQWLDKV 459


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 471 LQQRPCWLSSHLH 433
           +++ PCW+  HLH
Sbjct: 719 IKETPCWVEVHLH 731


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 116  TADSTK*AESISLQSGMLSPTPQLQGGS 199
            T+ ++   ++ SLQ+G+LSP   L G +
Sbjct: 3274 TSSTSGYRDNYSLQTGLLSPDGSLSGNA 3301


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 120 QIAPNEQKAFHCKVVCFLQLH 182
           ++AP EQ+   C   CF   H
Sbjct: 79  KLAPTEQEIHSCSPACFCSNH 99


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 9   KMSANKENNLVQAYLELNKFCQSSDYERALK 101
           K++A   +   QAY EL + CQ +  ER  K
Sbjct: 57  KLAACVVSEHEQAYRELKQRCQEAHDERTAK 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,886
Number of Sequences: 2352
Number of extensions: 12310
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)