Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m10
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    88   4e-18
Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical pr...    35   0.043
Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amin...    29   3.7  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine re...    28   6.5  

>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 46/146 (31%), Positives = 81/146 (55%)
 Frame = +3

Query: 12  MSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFK 191
           M+      L Q   ++++   S DY++AL +A K+++  P E  AF CK+V  +QL  + 
Sbjct: 1   MADASAGGLYQCLTDISRADTSGDYQKALTSANKLIRKYPKETFAFKCKLVAQIQLSQYA 60

Query: 192 EALATLTNAKNSALAADLLFEKAYAQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 371
           +AL  +       +   + FEKAY  YR +   EA++ +++  +      EL+AQ+ Y+ 
Sbjct: 61  DALELIRKTPAHQMG-HVGFEKAYIHYRQDELDEAIKELNTCDKDDVKALELKAQVFYKQ 119

Query: 372 EQYQDCYNLYRDLLKNTTDEYEDERK 449
           E YQ  Y++Y  LLKN +D+ ++ R+
Sbjct: 120 ENYQQAYDIYLYLLKNHSDDSDELRR 145


>Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical
           protein C06H2.7 protein.
          Length = 325

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
 Frame = +3

Query: 54  ELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSAL 233
           E+ K    S+ +R    A  + Q   +   +  C  V  L +  F E +AT+ N K+  +
Sbjct: 159 EILKIFNKSNIQRVQLRAETVSQQTKDLINSLECMNV-ELNIGKFDEMVATVNNIKDLRI 217

Query: 234 AADLLFEKAYAQYRLNSPK-EALQTVDSAPELTPALKELRA 353
              LLF +    +RLN  +  A  T  S P +   + E RA
Sbjct: 218 RQQLLFFQLITIFRLNIARINASVTAASLPLIVECINEWRA 258


>Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical
           protein ZK829.2 protein.
          Length = 905

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = +3

Query: 159 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYAQYRLNSPKEALQTVDSAPELT 329
           ++CF    N  F +AL    N   N +LA+ +L  K   +  +NSPK + + +DSA +L 
Sbjct: 740 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 799

Query: 330 PALKELRAQILYRLE 374
               ++     YR+E
Sbjct: 800 CNEYDILKPFQYRIE 814


>Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amino
           acid  decarboxylaseprotein.
          Length = 625

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = +3

Query: 159 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYAQYRLNSPKEALQTVDSAPELT 329
           ++CF    N  F +AL    N   N +LA+ +L  K   +  +NSPK + + +DSA +L 
Sbjct: 460 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 519

Query: 330 PALKELRAQILYRLE 374
               ++     YR+E
Sbjct: 520 CNEYDILKPFQYRIE 534


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 638 LLHSQNRLVRLSFKTDKASLYFPRIAKVLPE--LYANSYVFFIKLRQL*RWIKCCQVSYN 465
           LLH  NR++      D +S Y PR+ K+L E  + A+   F I+L +    I CC +  +
Sbjct: 322 LLHYYNRILSRYAPCDISSDYSPRMEKLLKEELMPAHDPEFLIELVES-ATIVCCDMLES 380

Query: 464 SGHV 453
             H+
Sbjct: 381 VQHL 384


>AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine
           receptor, class t protein65 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 255 KAYAQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 371
           K YA++++    + L T+   P++T    +LR  I Y+L
Sbjct: 59  KVYARFKIFKTYQTLSTLAILPKMTKFPSDLRENISYKL 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,876,690
Number of Sequences: 27780
Number of extensions: 270068
Number of successful extensions: 828
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)