Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5m09
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC044227-1|AAH44227.1| 257|Homo sapiens PARK2 co-regulated prot... 145 2e-34
BC030642-1|AAH30642.1| 257|Homo sapiens PARK2 co-regulated prot... 145 2e-34
AL354942-1|CAI16054.1| 257|Homo sapiens RP3-495O10.2 protein. 145 2e-34
AL137182-1|CAI19951.1| 257|Homo sapiens CpG island. protein. 145 2e-34
AL031121-1|CAI21557.1| 257|Homo sapiens RP3-495O10.2 protein. 145 2e-34
AK057286-1|BAB71410.1| 296|Homo sapiens protein ( Homo sapiens ... 145 2e-34
AF546872-1|AAN37911.1| 257|Homo sapiens PACRG protein. 145 2e-34
BC023002-1|AAH23002.1| 221|Homo sapiens chromosome 4 open readi... 44 7e-04
AC104065-1|AAY40910.1| 221|Homo sapiens unknown protein. 44 7e-04
AK098692-1|BAC05381.1| 248|Homo sapiens protein ( Homo sapiens ... 38 0.034
AJ318051-1|CAC85331.1| 698|Homo sapiens putative sulfhydryl oxi... 34 0.56
D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein. 31 3.0
AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coacti... 31 3.0
AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coacti... 31 3.0
AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactiv... 31 3.0
AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified transc... 31 3.0
AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone recepto... 31 3.0
AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coacti... 31 3.0
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein. 31 3.0
D12686-1|BAA02185.1| 1396|Homo sapiens eIF-4 gamma protein. 31 5.2
AY082886-1|AAL92872.1| 1600|Homo sapiens eukaryotic translation ... 31 5.2
AF281070-2|AAM69365.1| 1600|Homo sapiens eukaryotic translation ... 31 5.2
AF104913-1|AAC82471.1| 1560|Homo sapiens eukaryotic protein synt... 31 5.2
AB210013-1|BAE06095.1| 1624|Homo sapiens EIF4G1 variant protein ... 31 5.2
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein. 30 9.1
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r... 30 9.1
AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor co-rep... 30 9.1
>BC044227-1|AAH44227.1| 257|Homo sapiens PARK2 co-regulated
protein.
Length = 257
Score = 145 bits (351), Expect = 2e-34
Identities = 64/139 (46%), Positives = 86/139 (61%)
Frame = +1
Query: 283 FTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIE 462
FT++A+ KN+ V PP G F P +PT FRK Y+RG+FP+ +E G ++AWKV IE
Sbjct: 42 FTVKAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNKIAWKVEIE 101
Query: 463 KLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLVTKGSYKXXXXXXXXXXXXKNALATKR 642
KLD+HHYLP+FFDGL E T+PY F +GIHD++ G K KNAL +
Sbjct: 102 KLDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLRN 161
Query: 643 PAVICHALKCIQMIVTGSD 699
VIC LK +Q +V ++
Sbjct: 162 RQVICVTLKVLQHLVVSAE 180
>BC030642-1|AAH30642.1| 257|Homo sapiens PARK2 co-regulated
protein.
Length = 257
Score = 145 bits (351), Expect = 2e-34
Identities = 64/139 (46%), Positives = 86/139 (61%)
Frame = +1
Query: 283 FTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIE 462
FT++A+ KN+ V PP G F P +PT FRK Y+RG+FP+ +E G ++AWKV IE
Sbjct: 42 FTVKAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNKIAWKVEIE 101
Query: 463 KLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLVTKGSYKXXXXXXXXXXXXKNALATKR 642
KLD+HHYLP+FFDGL E T+PY F +GIHD++ G K KNAL +
Sbjct: 102 KLDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLRN 161
Query: 643 PAVICHALKCIQMIVTGSD 699
VIC LK +Q +V ++
Sbjct: 162 RQVICVTLKVLQHLVVSAE 180
>AL354942-1|CAI16054.1| 257|Homo sapiens RP3-495O10.2 protein.
Length = 257
Score = 145 bits (351), Expect = 2e-34
Identities = 64/139 (46%), Positives = 86/139 (61%)
Frame = +1
Query: 283 FTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIE 462
FT++A+ KN+ V PP G F P +PT FRK Y+RG+FP+ +E G ++AWKV IE
Sbjct: 42 FTVKAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNKIAWKVEIE 101
Query: 463 KLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLVTKGSYKXXXXXXXXXXXXKNALATKR 642
KLD+HHYLP+FFDGL E T+PY F +GIHD++ G K KNAL +
Sbjct: 102 KLDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLRN 161
Query: 643 PAVICHALKCIQMIVTGSD 699
VIC LK +Q +V ++
Sbjct: 162 RQVICVTLKVLQHLVVSAE 180
>AL137182-1|CAI19951.1| 257|Homo sapiens CpG island. protein.
Length = 257
Score = 145 bits (351), Expect = 2e-34
Identities = 64/139 (46%), Positives = 86/139 (61%)
Frame = +1
Query: 283 FTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIE 462
FT++A+ KN+ V PP G F P +PT FRK Y+RG+FP+ +E G ++AWKV IE
Sbjct: 42 FTVKAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNKIAWKVEIE 101
Query: 463 KLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLVTKGSYKXXXXXXXXXXXXKNALATKR 642
KLD+HHYLP+FFDGL E T+PY F +GIHD++ G K KNAL +
Sbjct: 102 KLDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLRN 161
Query: 643 PAVICHALKCIQMIVTGSD 699
VIC LK +Q +V ++
Sbjct: 162 RQVICVTLKVLQHLVVSAE 180
>AL031121-1|CAI21557.1| 257|Homo sapiens RP3-495O10.2 protein.
Length = 257
Score = 145 bits (351), Expect = 2e-34
Identities = 64/139 (46%), Positives = 86/139 (61%)
Frame = +1
Query: 283 FTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIE 462
FT++A+ KN+ V PP G F P +PT FRK Y+RG+FP+ +E G ++AWKV IE
Sbjct: 42 FTVKAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNKIAWKVEIE 101
Query: 463 KLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLVTKGSYKXXXXXXXXXXXXKNALATKR 642
KLD+HHYLP+FFDGL E T+PY F +GIHD++ G K KNAL +
Sbjct: 102 KLDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLRN 161
Query: 643 PAVICHALKCIQMIVTGSD 699
VIC LK +Q +V ++
Sbjct: 162 RQVICVTLKVLQHLVVSAE 180
>AK057286-1|BAB71410.1| 296|Homo sapiens protein ( Homo sapiens
cDNA FLJ32724 fis, clone TESTI2000951. ).
Length = 296
Score = 145 bits (351), Expect = 2e-34
Identities = 64/139 (46%), Positives = 86/139 (61%)
Frame = +1
Query: 283 FTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIE 462
FT++A+ KN+ V PP G F P +PT FRK Y+RG+FP+ +E G ++AWKV IE
Sbjct: 42 FTVKAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNRIAWKVEIE 101
Query: 463 KLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLVTKGSYKXXXXXXXXXXXXKNALATKR 642
KLD+HHYLP+FFDGL E T+PY F +GIHD++ G K KNAL +
Sbjct: 102 KLDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLRN 161
Query: 643 PAVICHALKCIQMIVTGSD 699
VIC LK +Q +V ++
Sbjct: 162 RQVICVTLKVLQHLVVSAE 180
>AF546872-1|AAN37911.1| 257|Homo sapiens PACRG protein.
Length = 257
Score = 145 bits (351), Expect = 2e-34
Identities = 64/139 (46%), Positives = 86/139 (61%)
Frame = +1
Query: 283 FTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIE 462
FT++A+ KN+ V PP G F P +PT FRK Y+RG+FP+ +E G ++AWKV IE
Sbjct: 42 FTVKAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNKIAWKVEIE 101
Query: 463 KLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLVTKGSYKXXXXXXXXXXXXKNALATKR 642
KLD+HHYLP+FFDGL E T+PY F +GIHD++ G K KNAL +
Sbjct: 102 KLDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLRN 161
Query: 643 PAVICHALKCIQMIVTGSD 699
VIC LK +Q +V ++
Sbjct: 162 RQVICVTLKVLQHLVVSAE 180
>BC023002-1|AAH23002.1| 221|Homo sapiens chromosome 4 open reading
frame 28 protein.
Length = 221
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 364 PTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIEKLDFHHYLPMFFDGLAEGTYPYSFIVE 543
P+ F Y +G P + +L W+ P E L F L +GL E +PY+F+ +
Sbjct: 77 PSAFAAIYSKGGIPCRLVHGSVKHRLQWECPPESLSFDPLLITLAEGLRETKHPYTFVSK 136
Query: 544 RGIHD-LVTKGS 576
G + L+ KG+
Sbjct: 137 EGFRELLLVKGA 148
>AC104065-1|AAY40910.1| 221|Homo sapiens unknown protein.
Length = 221
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 364 PTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIEKLDFHHYLPMFFDGLAEGTYPYSFIVE 543
P+ F Y +G P + +L W+ P E L F L +GL E +PY+F+ +
Sbjct: 77 PSAFAAIYSKGGIPCRLVHGSVKHRLQWECPPESLSFDPLLITLAEGLRETKHPYTFVSK 136
Query: 544 RGIHD-LVTKGS 576
G + L+ KG+
Sbjct: 137 EGFRELLLVKGA 148
>AK098692-1|BAC05381.1| 248|Homo sapiens protein ( Homo sapiens
cDNA FLJ25826 fis, clone TST08017. ).
Length = 248
Score = 37.9 bits (84), Expect = 0.034
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 364 PTMFRKCYQRGEFPVCIEFTITGKQLAWKVPIEKLDFHHYLPMFFDGLAEGTYPYSFIVE 543
P+ F Y +G P + +L + P E L F L +GL E +PY+F+ +
Sbjct: 77 PSAFAAIYSKGGIPCRLVHGSVKHRLQRECPPESLSFDPLLITLAEGLRETKHPYTFVSK 136
Query: 544 RGIHD-LVTKGS 576
G + L+ KG+
Sbjct: 137 EGFRELLLVKGA 148
>AJ318051-1|CAC85331.1| 698|Homo sapiens putative sulfhydryl
oxidase precursor protein.
Length = 698
Score = 33.9 bits (74), Expect = 0.56
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 259 RKPRIVPAFTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEFPVCIEFTITGKQ 438
R+ R V I LQ +T+ PP C DP+ P + RG V I F
Sbjct: 163 RELRTVRQTMIDFLQNHTEGSRPPACPRLDPIQPSDVL-SLLDNRGSHYVAIVFESNSSY 221
Query: 439 LAWKVPIEKLDF 474
L W+V ++ + +
Sbjct: 222 LGWEVILDLIPY 233
>D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein.
Length = 2079
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 PSPNYPYGYKTRKPRIVPA-FTIQALQKNTKVVP--PPKCGVFDPLPPRPTMFRKCYQRG 396
P P YP R P P+ ++ + N + PP+ + PLPPRP + R Q+G
Sbjct: 1233 PRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINI--PLPPRPNLNRGFDQQG 1290
Query: 397 EFPVCIE 417
P ++
Sbjct: 1291 LNPTTLK 1297
>AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coactivator
6 protein.
Length = 2063
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 PSPNYPYGYKTRKPRIVPA-FTIQALQKNTKVVP--PPKCGVFDPLPPRPTMFRKCYQRG 396
P P YP R P P+ ++ + N + PP+ + PLPPRP + R Q+G
Sbjct: 1217 PRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINI--PLPPRPNLNRGFDQQG 1274
Query: 397 EFPVCIE 417
P ++
Sbjct: 1275 LNPTTLK 1281
>AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coactivator
protein.
Length = 2063
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 PSPNYPYGYKTRKPRIVPA-FTIQALQKNTKVVP--PPKCGVFDPLPPRPTMFRKCYQRG 396
P P YP R P P+ ++ + N + PP+ + PLPPRP + R Q+G
Sbjct: 1217 PRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINI--PLPPRPNLNRGFDQQG 1274
Query: 397 EFPVCIE 417
P ++
Sbjct: 1275 LNPTTLK 1281
>AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactivator
AIB3 protein.
Length = 2001
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 PSPNYPYGYKTRKPRIVPA-FTIQALQKNTKVVP--PPKCGVFDPLPPRPTMFRKCYQRG 396
P P YP R P P+ ++ + N + PP+ + PLPPRP + R Q+G
Sbjct: 1155 PRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINI--PLPPRPNLNRGFDQQG 1212
Query: 397 EFPVCIE 417
P ++
Sbjct: 1213 LNPTTLK 1219
>AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified
transcriptional coactivator ASC-2 protein.
Length = 2063
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 PSPNYPYGYKTRKPRIVPA-FTIQALQKNTKVVP--PPKCGVFDPLPPRPTMFRKCYQRG 396
P P YP R P P+ ++ + N + PP+ + PLPPRP + R Q+G
Sbjct: 1217 PRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINI--PLPPRPNLNRGFDQQG 1274
Query: 397 EFPVCIE 417
P ++
Sbjct: 1275 LNPTTLK 1281
>AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone receptor
binding protein protein.
Length = 2063
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 PSPNYPYGYKTRKPRIVPA-FTIQALQKNTKVVP--PPKCGVFDPLPPRPTMFRKCYQRG 396
P P YP R P P+ ++ + N + PP+ + PLPPRP + R Q+G
Sbjct: 1217 PRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINI--PLPPRPNLNRGFDQQG 1274
Query: 397 EFPVCIE 417
P ++
Sbjct: 1275 LNPTTLK 1281
>AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coactivator
RAP250 protein.
Length = 2063
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 226 PSPNYPYGYKTRKPRIVPA-FTIQALQKNTKVVP--PPKCGVFDPLPPRPTMFRKCYQRG 396
P P YP R P P+ ++ + N + PP+ + PLPPRP + R Q+G
Sbjct: 1217 PRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINI--PLPPRPNLNRGFDQQG 1274
Query: 397 EFPVCIE 417
P ++
Sbjct: 1275 LNPTTLK 1281
>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
Length = 1682
Score = 31.5 bits (68), Expect = 3.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 148 IIAKMVLLPPCVPQSCGKDFRNSLKKPSPNYPYGYKTRKPRIVPAFTIQALQKNTKVVPP 327
++ + LPP P SC ++ S ++P P + P + P L K + VPP
Sbjct: 599 LVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPPPGPLSKAPQPVPP 658
Query: 328 PKCGVFDPLPPR-PTMF 375
GV + LP R P +F
Sbjct: 659 ---GVGE-LPARGPRLF 671
>D12686-1|BAA02185.1| 1396|Homo sapiens eIF-4 gamma protein.
Length = 1396
Score = 30.7 bits (66), Expect = 5.2
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 IIAKMVLLPPCVPQSCGKDFRNS-LKKPSPNYPYGYKTRKPR-IVPAFTIQA-LQKNTKV 318
I+ V L VP+S +F +S L+ P+P + + +P +VP+ ++ ++ + ++
Sbjct: 128 ILEVEVTLSKPVPES---EFSSSPLQAPTPLASHTVEIHEPNGMVPSEDLEPEVESSPEL 184
Query: 319 VPPPKCGVFDPLPPRPT 369
PPP C P+P PT
Sbjct: 185 APPPACPSESPVPIAPT 201
>AY082886-1|AAL92872.1| 1600|Homo sapiens eukaryotic translation
initiation factor 4GI protein.
Length = 1600
Score = 30.7 bits (66), Expect = 5.2
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 IIAKMVLLPPCVPQSCGKDFRNS-LKKPSPNYPYGYKTRKPR-IVPAFTIQA-LQKNTKV 318
I+ V L VP+S +F +S L+ P+P + + +P +VP+ ++ ++ + ++
Sbjct: 324 ILEVEVTLSKPVPES---EFSSSPLQAPTPLASHTVEIHEPNGMVPSEDLEPEVESSPEL 380
Query: 319 VPPPKCGVFDPLPPRPT 369
PPP C P+P PT
Sbjct: 381 APPPACPSESPVPIAPT 397
>AF281070-2|AAM69365.1| 1600|Homo sapiens eukaryotic translation
initiation factor 4G I protein.
Length = 1600
Score = 30.7 bits (66), Expect = 5.2
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 IIAKMVLLPPCVPQSCGKDFRNS-LKKPSPNYPYGYKTRKPR-IVPAFTIQA-LQKNTKV 318
I+ V L VP+S +F +S L+ P+P + + +P +VP+ ++ ++ + ++
Sbjct: 324 ILEVEVTLSKPVPES---EFSSSPLQAPTPLASHTVEIHEPNGMVPSEDLEPEVESSPEL 380
Query: 319 VPPPKCGVFDPLPPRPT 369
PPP C P+P PT
Sbjct: 381 APPPACPSESPVPIAPT 397
>AF104913-1|AAC82471.1| 1560|Homo sapiens eukaryotic protein
synthesis initiation factor protein.
Length = 1560
Score = 30.7 bits (66), Expect = 5.2
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 IIAKMVLLPPCVPQSCGKDFRNS-LKKPSPNYPYGYKTRKPR-IVPAFTIQA-LQKNTKV 318
I+ V L VP+S +F +S L+ P+P + + +P +VP+ ++ ++ + ++
Sbjct: 284 ILEVEVTLSKPVPES---EFSSSPLQAPTPLASHTVEIHEPNGMVPSEDLEPEVESSPEL 340
Query: 319 VPPPKCGVFDPLPPRPT 369
PPP C P+P PT
Sbjct: 341 APPPACPSESPVPIAPT 357
>AB210013-1|BAE06095.1| 1624|Homo sapiens EIF4G1 variant protein
protein.
Length = 1624
Score = 30.7 bits (66), Expect = 5.2
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 IIAKMVLLPPCVPQSCGKDFRNS-LKKPSPNYPYGYKTRKPR-IVPAFTIQA-LQKNTKV 318
I+ V L VP+S +F +S L+ P+P + + +P +VP+ ++ ++ + ++
Sbjct: 349 ILEVEVTLSKPVPES---EFSSSPLQAPTPLASHTVEIHEPNGMVPSEDLEPEVESSPEL 405
Query: 319 VPPPKCGVFDPLPPRPT 369
PPP C P+P PT
Sbjct: 406 APPPACPSESPVPIAPT 422
>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
Length = 2461
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 184 PQSCGKDFRNSLKKPSPNYPYGYKTRKPRIVPAFTIQALQKNTKVVPPPKCGVFDPLPPR 363
PQ G R + P+P P + KP PAF +A QK P G+ P+PPR
Sbjct: 994 PQQPGSSPRGKSRSPAP--PADKEAEKPVFFPAFAAEA-QKLPGDPPCWTSGLPFPVPPR 1050
>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor extended isofo
protein.
Length = 2507
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 184 PQSCGKDFRNSLKKPSPNYPYGYKTRKPRIVPAFTIQALQKNTKVVPPPKCGVFDPLPPR 363
PQ G R + P+P P + KP PAF +A QK P G+ P+PPR
Sbjct: 994 PQQPGSSPRGKSRSPAP--PADKEAEKPVFFPAFAAEA-QKLPGDPPCWTSGLPFPVPPR 1050
>AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor
co-repressor 2 variant protein.
Length = 1469
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 184 PQSCGKDFRNSLKKPSPNYPYGYKTRKPRIVPAFTIQALQKNTKVVPPPKCGVFDPLPPR 363
PQ G R + P+P P + KP PAF +A QK P G+ P+PPR
Sbjct: 1030 PQQPGSSPRGKSRSPAP--PADKEAEKPVFFPAFAAEA-QKLPGDPPCWTSGLPFPVPPR 1086
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,381,847
Number of Sequences: 237096
Number of extensions: 2454309
Number of successful extensions: 5798
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5796
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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