Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m08
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77663-17|CAB54256.5|  500|Caenorhabditis elegans Hypothetical p...    70   2e-12
AL021346-4|CAB54259.5|  500|Caenorhabditis elegans Hypothetical ...    70   2e-12
Z92777-11|CAB07168.2|  338|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    29   4.4  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    29   4.4  

>Z77663-17|CAB54256.5|  500|Caenorhabditis elegans Hypothetical
           protein F53F4.14 protein.
          Length = 500

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 207 LRYGIPTEDLYVTINGKTIAS--NFVLKNC-QNIVRISS--RLVGGKGGFGSMLRAIGAQ 371
           +R   P++  YV  NGK I +   F+ +N  Q++V+ S   R+ GGKGGFGS+LR+   +
Sbjct: 125 IRTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVKYSFHLRVRGGKGGFGSLLRSF--R 182

Query: 372 IEKTTNREACRDLSGRRLRDINEEKRLRKWLDGXXXXXXXXXXXXXXXXXXXLAEPKIEV 551
           + K+TN+   RDL+GRR+  ++EE +L+++L+                     A P   +
Sbjct: 183 VNKSTNKLMMRDLNGRRMASVDEEAKLKRYLEKQARKEQELKEKRKAKLEKLTAGPAKHM 242

Query: 552 NLNPEYEKERQALPERVSAAVDAGW 626
             + +Y   R+ +  +   A +AG+
Sbjct: 243 FEDQDYLSRREEIINKTEDACEAGF 267


>AL021346-4|CAB54259.5|  500|Caenorhabditis elegans Hypothetical
           protein F53F4.14 protein.
          Length = 500

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 207 LRYGIPTEDLYVTINGKTIAS--NFVLKNC-QNIVRISS--RLVGGKGGFGSMLRAIGAQ 371
           +R   P++  YV  NGK I +   F+ +N  Q++V+ S   R+ GGKGGFGS+LR+   +
Sbjct: 125 IRTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVKYSFHLRVRGGKGGFGSLLRSF--R 182

Query: 372 IEKTTNREACRDLSGRRLRDINEEKRLRKWLDGXXXXXXXXXXXXXXXXXXXLAEPKIEV 551
           + K+TN+   RDL+GRR+  ++EE +L+++L+                     A P   +
Sbjct: 183 VNKSTNKLMMRDLNGRRMASVDEEAKLKRYLEKQARKEQELKEKRKAKLEKLTAGPAKHM 242

Query: 552 NLNPEYEKERQALPERVSAAVDAGW 626
             + +Y   R+ +  +   A +AG+
Sbjct: 243 FEDQDYLSRREEIINKTEDACEAGF 267


>Z92777-11|CAB07168.2|  338|Caenorhabditis elegans Hypothetical
           protein C17H1.4 protein.
          Length = 338

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 364 ALKLRKLRIGKPAVTSQDVDYETLMKRRD*ESG*TDKKSANVR-LQKENKRKSKRFLQNQ 540
           ALK +K    K  +T + +D E L + ++ ++   D   ANV+ L+KEN R  K  L  +
Sbjct: 118 ALKNQKDADNKEILTREKIDQEMLKQTQERKNHSEDIILANVKALKKENTRFQKESLNEK 177

Query: 541 K 543
           K
Sbjct: 178 K 178


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
            C25D7.3 protein.
          Length = 2150

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 528  LAEPKIEVNLNPEYEKERQALPERVSAAVDAGWQNA 635
            L + K+E+N  P  ++E + L ERV   ++ G +NA
Sbjct: 1740 LDDIKLELNGEPPQKRECEILMERVQVKIEEGVENA 1775


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
            protein.
          Length = 2150

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 528  LAEPKIEVNLNPEYEKERQALPERVSAAVDAGWQNA 635
            L + K+E+N  P  ++E + L ERV   ++ G +NA
Sbjct: 1740 LDDIKLELNGEPPQKRECEILMERVQVKIEEGVENA 1775


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,438,082
Number of Sequences: 27780
Number of extensions: 319223
Number of successful extensions: 972
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)