Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m07
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.49 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   4.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.6  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   4.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   6.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   6.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   6.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.0  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   8.0  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 499 QPEGAVSRLDYVGKAITLTRHKIDGKVPLIGFTGAPFTLFGYMLE 633
           +PE    RL    +   +TRH IDG++  IG       + GYM E
Sbjct: 236 RPEPLCERLFEASREEYVTRHLIDGRI--IGCDQRISFIAGYMTE 278


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 239 CDKLEDIYQNFRK 277
           CDK E I Q+FR+
Sbjct: 211 CDKFEQINQHFRR 223


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 239 CDKLEDIYQNFRK 277
           CDK E I Q+FR+
Sbjct: 167 CDKFEQINQHFRR 179


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 641 EAKQCLK-QKNGSRSILKMSID 703
           E  +C + QKNGS+ I++  ID
Sbjct: 74  ECSKCSETQKNGSKKIMRHLID 95


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -2

Query: 756 LHLHHHIVNYNIS 718
           +H  HH+VN++++
Sbjct: 330 IHAQHHVVNHHVA 342


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 468 WFRKYWTDSRVHF 430
           +FR++WTD R+ +
Sbjct: 91  YFRQFWTDPRLAY 103


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 139 NMEYSNKNFPELKN 180
           N++Y N NFP + +
Sbjct: 87  NLDYGNSNFPPINH 100


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 349 LRRYEHLDASIIFSDILVI 405
           L RY  L   I+FS+ILVI
Sbjct: 138 LARYVALALVILFSEILVI 156


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 35  YIKCTYIKINRFFYFTHNS*FGPG*LFFNQNLSFI 139
           ++ C Y     F  FT +  F    +FFN +L F+
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFL 196


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 349 LRRYEHLDASIIFSDILVI 405
           L RY  L   I+FS+ILVI
Sbjct: 156 LARYVALALVILFSEILVI 174


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 139 NMEYSNKNFPELKN 180
           N++Y N NFP + +
Sbjct: 87  NLDYGNSNFPPINH 100


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 139 NMEYSNKNFPELKN 180
           N++Y N NFP + +
Sbjct: 87  NLDYGNSNFPPINH 100


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +3

Query: 294 FFHGLSNSRISL*SNTAAAQKV*ALGCIYNIQ*YSCDTTSTRHDC*NAP 440
           F H  S +R     N  A +++   G +YN + +SCD       C   P
Sbjct: 106 FGHETSCTRYWTCWNGTATEQLCIGGLLYNERTHSCDWPENVDGCQKHP 154


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 659 KQKNGSRSILKMSIDS 706
           KQK GSR I+   ID+
Sbjct: 81  KQKEGSRKIIHYLIDN 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,006
Number of Sequences: 336
Number of extensions: 4061
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)