Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m06
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.1  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -2

Query: 180 AIIGESKYPDIYL 142
           A+ G+++YPDI++
Sbjct: 86  ALFGKTRYPDIFM 98


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 100 LNYIIFLEFIYSANQIYV 153
           L Y+IF+  +Y+AN + +
Sbjct: 908 LGYLIFVSTLYTANVVCI 925


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +1

Query: 91  LSVLNYIIFLEFIYSANQIYVRILRFADNCCCIAHQKR 204
           L   NY + +   +   + + R+L+  ++C  I   KR
Sbjct: 75  LYCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKR 112


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +1

Query: 118 LEFIYSANQIYVRILRFADNCCCIAHQKRCQPRLLEFS 231
           + F++S   I +R L   ++C  + ++ R    +++FS
Sbjct: 389 INFMFSFGFILLRFLSVFESCTRLNNESRKPSFVIQFS 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,731
Number of Sequences: 336
Number of extensions: 3593
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)