Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m06
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39744-2|AAK18883.2|  362|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z79758-8|CAI79179.1|  695|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z79758-7|CAD98730.1|  763|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z79758-6|CAD98729.1|  673|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z79758-5|CAB54321.1|  687|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z79758-4|CAB02133.2|  790|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z79758-3|CAB02134.1|  689|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z29121-6|CAH19096.1|  405|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z29121-5|CAD54174.2|  403|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z22180-12|CAH19086.1|  405|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z22180-11|CAD54147.2|  403|Caenorhabditis elegans Hypothetical p...    28   6.3  
AC006630-6|AAK68328.1|  105|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z93381-4|CAB07607.2|  382|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U39744-2|AAK18883.2|  362|Caenorhabditis elegans Hypothetical
           protein C03F11.2 protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = -1

Query: 544 NKICIVADVVLI*KHGHLLSITIKFRHSTKNYSGYDSLLFFLKSVKNAAIFEN 386
           NK+   AD V I  HG L  IT + ++    ++ Y++ L   K+V+++  F+N
Sbjct: 161 NKVICYADYV-IPGHGKLFRITQEMKNGADCFTKYETTLDDNKTVQSSPQFQN 212


>Z79758-8|CAI79179.1|  695|Caenorhabditis elegans Hypothetical
           protein W10D5.3g protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 462 LCRNFIVIESRCP-CFHIRTTSATMQILFN*KKITYKIDVC 581
           LC+  +   SRC  C H++       ++ N KK T++  VC
Sbjct: 305 LCKTRMTTPSRCQDCTHLQCFDLLSYLMMNEKKPTWQCPVC 345


>Z79758-7|CAD98730.1|  763|Caenorhabditis elegans Hypothetical
           protein W10D5.3f protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 462 LCRNFIVIESRCP-CFHIRTTSATMQILFN*KKITYKIDVC 581
           LC+  +   SRC  C H++       ++ N KK T++  VC
Sbjct: 372 LCKTRMTTPSRCQDCTHLQCFDLLSYLMMNEKKPTWQCPVC 412


>Z79758-6|CAD98729.1|  673|Caenorhabditis elegans Hypothetical
           protein W10D5.3e protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 462 LCRNFIVIESRCP-CFHIRTTSATMQILFN*KKITYKIDVC 581
           LC+  +   SRC  C H++       ++ N KK T++  VC
Sbjct: 372 LCKTRMTTPSRCQDCTHLQCFDLLSYLMMNEKKPTWQCPVC 412


>Z79758-5|CAB54321.1|  687|Caenorhabditis elegans Hypothetical
           protein W10D5.3d protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 462 LCRNFIVIESRCP-CFHIRTTSATMQILFN*KKITYKIDVC 581
           LC+  +   SRC  C H++       ++ N KK T++  VC
Sbjct: 370 LCKTRMTTPSRCQDCTHLQCFDLLSYLMMNEKKPTWQCPVC 410


>Z79758-4|CAB02133.2|  790|Caenorhabditis elegans Hypothetical
           protein W10D5.3c protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 462 LCRNFIVIESRCP-CFHIRTTSATMQILFN*KKITYKIDVC 581
           LC+  +   SRC  C H++       ++ N KK T++  VC
Sbjct: 427 LCKTRMTTPSRCQDCTHLQCFDLLSYLMMNEKKPTWQCPVC 467


>Z79758-3|CAB02134.1|  689|Caenorhabditis elegans Hypothetical
           protein W10D5.3a protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 462 LCRNFIVIESRCP-CFHIRTTSATMQILFN*KKITYKIDVC 581
           LC+  +   SRC  C H++       ++ N KK T++  VC
Sbjct: 372 LCKTRMTTPSRCQDCTHLQCFDLLSYLMMNEKKPTWQCPVC 412


>Z29121-6|CAH19096.1|  405|Caenorhabditis elegans Hypothetical
           protein ZK757.4b protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = +1

Query: 160 LRFADNCCCIA-----HQKRCQPRLLEFSFH 237
           +RF D CCCI      H   C+  +L+F  H
Sbjct: 133 IRFCDKCCCIKPDRSHHCSMCEQCVLKFDHH 163


>Z29121-5|CAD54174.2|  403|Caenorhabditis elegans Hypothetical
           protein ZK757.4a protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = +1

Query: 160 LRFADNCCCIA-----HQKRCQPRLLEFSFH 237
           +RF D CCCI      H   C+  +L+F  H
Sbjct: 131 IRFCDKCCCIKPDRSHHCSMCEQCVLKFDHH 161


>Z22180-12|CAH19086.1|  405|Caenorhabditis elegans Hypothetical
           protein ZK757.4b protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = +1

Query: 160 LRFADNCCCIA-----HQKRCQPRLLEFSFH 237
           +RF D CCCI      H   C+  +L+F  H
Sbjct: 133 IRFCDKCCCIKPDRSHHCSMCEQCVLKFDHH 163


>Z22180-11|CAD54147.2|  403|Caenorhabditis elegans Hypothetical
           protein ZK757.4a protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = +1

Query: 160 LRFADNCCCIA-----HQKRCQPRLLEFSFH 237
           +RF D CCCI      H   C+  +L+F  H
Sbjct: 131 IRFCDKCCCIKPDRSHHCSMCEQCVLKFDHH 161


>AC006630-6|AAK68328.1|  105|Caenorhabditis elegans Hypothetical
           protein F14H12.6 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 12/55 (21%)
 Frame = +1

Query: 121 EFIYSANQIYVRILRFA---DNCCCIAHQKRCQPR---------LLEFSFHAKCN 249
           +F+ SAN IYV+I   A     CCC A   RCQ R         ++E S H+ CN
Sbjct: 51  DFLLSAN-IYVQISFVAAVVGVCCCFAVFARCQTRSEPKWYIEGVIERSRHSACN 104


>Z93381-4|CAB07607.2|  382|Caenorhabditis elegans Hypothetical
           protein F28G4.4 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 500 MFSYQNNVCDDANFVQLEEN 559
           +F ++N  CD+ NF +L EN
Sbjct: 314 VFQHENGTCDETNFHKLREN 333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,657,041
Number of Sequences: 27780
Number of extensions: 328228
Number of successful extensions: 676
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)