Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m05
         (312 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    25   0.66 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   4.6  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          22   4.6  

>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 75  LNGEVLMFE*TKLLIIKYKNGGTLI 1
           LN EV+ F  TKL +I  +N G L+
Sbjct: 136 LNNEVIPFYLTKLNVIAKENNGHLV 160


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 35  KSFVYSNISTSPLSCVC 85
           KSFV  ++  + +SC+C
Sbjct: 113 KSFVRHSMEATAMSCIC 129


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 35  KSFVYSNISTSPLSCVC 85
           KSFV  ++  + +SC+C
Sbjct: 113 KSFVRHSMEATAMSCIC 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,571
Number of Sequences: 2352
Number of extensions: 4501
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20316549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)