Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m04
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 171 MKARTWSSLFRILTTIMKLDMS 236
           +K   WS+LF IL  +   D+S
Sbjct: 90  LKRHKWSTLFEILLKLESKDLS 111


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 280 LWFIYQVIFVVVSLTDMSSFII 215
           L F    IF+VVS+  MS+++I
Sbjct: 239 LMFTSHFIFIVVSIFYMSAYLI 260


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 494 YYGYYLF*IHLCMLV 450
           YY + LF +HL +LV
Sbjct: 242 YYAFILFTVHLLLLV 256



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 521 FAQKYLHRNYYGYYLF*IHLCM 456
           F   +L   YY YY F I LC+
Sbjct: 92  FTVHFLLCTYYFYYAFIILLCV 113


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -3

Query: 382 FSCFIDFFLWYFTFLMVYNRRTIRICEVTTFVRCLWFIY 266
           + CF   F W    + +++R      +  TFV  +W  Y
Sbjct: 323 YLCFC--FYWLLVMVAMFSRTQQSANKTATFVHEIWNKY 359


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -3

Query: 382 FSCFIDFFLWYFTFLMVYNRRTIRICEVTTFVRCLWFIY 266
           + CF   F W    + +++R      +  TFV  +W  Y
Sbjct: 279 YLCFC--FYWLLVMVAMFSRTQQSANKTATFVHEIWNKY 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,893
Number of Sequences: 336
Number of extensions: 3255
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)