Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m02
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.49 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.6  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.0  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
 Frame = +2

Query: 281 TEH-VTHKIE---SISDMKVQNECYIEPIQPELDRSTTESMPQHTESFV--IEQMVTVNS 442
           TEH  TH  E   S+ +  +   C     QP L+       P     F   + Q  T   
Sbjct: 35  TEHNYTHNNEMYHSVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLSQYDTCQQ 94

Query: 443 ---EEEMELKNEQTALESDNKENSLDCEPVPKSAPNSRPQTPKT 565
               E   L NE +    +NK +  D +     A  +RPQ  KT
Sbjct: 95  GIYPENKTLINETSLQLDENKLDKKDDDSPALRALLTRPQAKKT 138


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 576 VGHKRQDH*VVQRHHCSSSNRRVDRIHHGDQQR 674
           V HK  ++  VQ  H       V  I H D +R
Sbjct: 233 VSHKYTNYSAVQEMHRKGHEIAVHSITHNDDER 265


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 471 KPLLNLTIKKILWIVNLYQNLRQIAAHKLLKLYKA 575
           +  LN+T   +L    +Y     I   KL+  YK+
Sbjct: 42  RSFLNITASAVLLPFAIYHIFMHIVPTKLISFYKS 76


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 ENSLDCEPVPKSAPNSRPQTPKTLQ 571
           E+ L+C  +P S  NSR  +   +Q
Sbjct: 71  EDPLNCRDLPNSRCNSRESSDSLVQ 95


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 527 KSAPNSRPQTPKTLQ 571
           K  PN +P+TP T Q
Sbjct: 111 KHKPNRKPRTPFTTQ 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,342
Number of Sequences: 336
Number of extensions: 3501
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)