Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5m02
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 32 0.38
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 31 0.88
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 31 0.88
AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical ... 31 1.2
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 30 2.0
AF039716-5|AAB96740.1| 488|Caenorhabditis elegans Hypothetical ... 29 2.7
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 29 2.7
Z81529-3|CAB04300.1| 224|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81529-1|CAB04294.1| 224|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 29 4.7
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 29 4.7
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 4.7
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 28 6.2
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 28 6.2
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 28 6.2
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 28 6.2
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 28 6.2
AF039041-5|AAB94187.1| 128|Caenorhabditis elegans Hypothetical ... 28 6.2
AF039041-4|ABS19460.1| 112|Caenorhabditis elegans Hypothetical ... 28 6.2
AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical ... 28 6.2
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL021487-11|CAA16355.2| 330|Caenorhabditis elegans Hypothetical... 28 8.2
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 278 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 457
+T+HV K ++ K++++ P QP R E++P+ ES + + E
Sbjct: 86 MTDHVASKKHKENEKKIEDDVKKGPKQP---RKKPENLPKKPESLKEPENDEDDDSSGWE 142
Query: 458 LKNEQTALESDNKENSL---DCEPVPKSAPN 541
+E+ +E N++++L C P++ PN
Sbjct: 143 TDDEEEGVEELNEDDALPVTSCLFCPQTKPN 173
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 401 TESFVIEQMVTVNSEEEMELKNEQTAL--ESDNKENSLDCEPVPKSAPNSRPQTPKTLQ 571
TE V E+++ +NS ++++ L E D E+ LD EP+ + P + TPK LQ
Sbjct: 3 TEEKVEEEVIILNSSINNVSQDDEIVLDYEEDLLEDPLD-EPIEQKEPKAAEPTPKQLQ 60
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 577 SATNAKTIKSSNDTIAPPAIVESTEYTTETNNACQAKNAYSNNN 708
S+++AK + SS PP V +T TT+T N+ Q ++ Y N N
Sbjct: 15 SSSSAKPVTSSKKP--PPNDVTTTTNTTKTTNSNQQEDMYLNGN 56
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 577 SATNAKTIKSSNDTIAPPAIVESTEYTTETNNACQAKNAYSNNN 708
S+++AK + SS PP V +T TT+T N+ Q ++ Y N N
Sbjct: 15 SSSSAKPVTSSKKP--PPNDVTTTTNTTKTTNSNQQEDMYLNGN 56
>AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical
protein Y55F3C.9 protein.
Length = 711
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = -2
Query: 551 VGGYLAQILVQVHNPKNFLYCQIQERFVRFSIPFLLQNLP*PFVQ*QMTQYAVASIP*LT 372
+GG Q L++ +NF C + FV+ ++ QN F + Y + ++ LT
Sbjct: 626 IGGMAIQFLIKTAVAQNFFQCHALDVFVKCTVKSRNQNFSQYFTGMNQSAYHIFNV--LT 683
Query: 371 GLILAVSVQ 345
G++ + ++
Sbjct: 684 GVLKGIDIE 692
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 446 EEMELKNEQTALESDNKENSLDCEPV--PKSAPNSRPQ 553
E E + +++ ES+ EN+ DCE V P+S P S P+
Sbjct: 94 EMKEAEEHESSDESEADENASDCEVVESPESTPQSTPK 131
>AF039716-5|AAB96740.1| 488|Caenorhabditis elegans Hypothetical
protein W03G9.5 protein.
Length = 488
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 344 IEPIQPELDRSTTESMPQHTESFVIEQMVT---VNSEEEMELKNEQTALESDNKENSLDC 514
IE E+D S ++PQ+ + +E+++ EE + + T +E +N L
Sbjct: 323 IEKDMTEVDLSKLLNVPQNERNITMEEIIAAGKTTEEEGLNTAQDDTIVEDEN--GFLGK 380
Query: 515 EPVPKSAPNSRPQTPKTLQ 571
+ + P++R +T K ++
Sbjct: 381 QEAKPATPSARSETSKKVK 399
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Frame = +2
Query: 284 EHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTE-SFVIEQMVTVNSEEEMEL 460
+H+ +I ++DM EP+Q E + TES T + + ++ +S+ E
Sbjct: 3526 DHIA-RIAEMADMDYNTPFTAEPVQDEEEEPITESGSDATSGADIFDEQEDASSDREKRS 3584
Query: 461 -----KNEQTALESDNKENSLDCEPVPKSAPNSRPQTPKTLQ 571
N +T+LE D + P P + + P+ Q
Sbjct: 3585 GTSFPDNAETSLEDDTAHEKSYPQLEPSEEPVMKSKEPELTQ 3626
>Z81529-3|CAB04300.1| 224|Caenorhabditis elegans Hypothetical
protein F35E8.4 protein.
Length = 224
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 592 KTIK--SSNDTIAPPAIVESTEYTTETNNACQ--AKNAYSNNN 708
KT K S+ T+APP T + +T AC+ A+N + NN
Sbjct: 164 KTCKRCSAATTVAPPVTNNCTVFPPDTRTACKAWARNGFCTNN 206
>Z81529-1|CAB04294.1| 224|Caenorhabditis elegans Hypothetical
protein F35E8.1 protein.
Length = 224
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 592 KTIK--SSNDTIAPPAIVESTEYTTETNNACQ--AKNAYSNNN 708
KT K S+ T+APP T + +T AC+ A+N + NN
Sbjct: 164 KTCKRCSAATTVAPPVTNNCTVFPPDTRTACKAWARNGFCTNN 206
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 568 TRQSATNAKTIKSSNDTIAPPAIVESTEYTTETNNACQAK 687
TRQ+ T A+T ++ T APP ST +AC A+
Sbjct: 502 TRQTTTTARTSTTTTTTQAPPTTTTSTSQCASW-SACSAQ 540
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 568 TRQSATNAKTIKSSNDTIAPPAIVESTEYTTETNNACQAK 687
TRQ+ T A+T ++ T APP ST +AC A+
Sbjct: 502 TRQTTTTARTSTTTTTTQAPPTTTTSTSQCASW-SACSAQ 540
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 347 EPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVP 526
+P+Q + TT + + ++ + V S+E +ELK + +A+ D E D +PVP
Sbjct: 1832 QPLQHIQEVQTTPAEQSNWDTDEFSRQPPVLSDERIELKTDPSAI--DKFEVRSDEDPVP 1889
Query: 527 K 529
K
Sbjct: 1890 K 1890
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 419 EQMVTVNSEEEMELKNEQTALESD--NKENSLDCEPVPKSAPNSRPQTPK 562
E+ + EEE + ++E++ ESD ++E + + P+ PN +P T K
Sbjct: 600 EEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDSEPEEKPNPKPSTKK 649
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 419 EQMVTVNSEEEMELKNEQTALESD--NKENSLDCEPVPKSAPNSRPQTPK 562
E+ + EEE + ++E++ ESD ++E + + P+ PN +P T K
Sbjct: 610 EEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDSEPEEKPNPKPSTKK 659
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 136 STDPASSDSGVSCTRRPECYESKSIV 213
++ PASS G S RPEC S I+
Sbjct: 533 TSTPASSTPGTSRAARPECLRSSGII 558
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 136 STDPASSDSGVSCTRRPECYESKSIV 213
++ PASS G S RPEC S I+
Sbjct: 584 TSTPASSTPGTSRAARPECLRSSGII 609
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 136 STDPASSDSGVSCTRRPECYESKSIV 213
++ PASS G S RPEC S I+
Sbjct: 584 TSTPASSTPGTSRAARPECLRSSGII 609
>AF039041-5|AAB94187.1| 128|Caenorhabditis elegans Hypothetical
protein W03F8.6a protein.
Length = 128
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 106 QQSL*NKIKRSTDPASSDSGVSCTRRPECYES-----KSIVDPKTITKSCSSVAGAFED 267
Q+++ N + T+ V C C+ S K D TITKSC V FED
Sbjct: 29 QETVSNGRRLPTEIGGPYQSVQCNDADFCFNSYVRRHKKGDDSYTITKSCGEVGKCFED 87
>AF039041-4|ABS19460.1| 112|Caenorhabditis elegans Hypothetical
protein W03F8.6b protein.
Length = 112
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 106 QQSL*NKIKRSTDPASSDSGVSCTRRPECYES-----KSIVDPKTITKSCSSVAGAFED 267
Q+++ N + T+ V C C+ S K D TITKSC V FED
Sbjct: 29 QETVSNGRRLPTEIGGPYQSVQCNDADFCFNSYVRRHKKGDDSYTITKSCGEVGKCFED 87
>AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical
protein C03H5.3 protein.
Length = 287
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +2
Query: 347 EPIQPELDRSTTESMPQHTESFV-IEQMVTVNSEEEMEL--KNEQTALESDNKENSLDCE 517
+ + PE D P++ ++ V I + +E ME+ KN T++E+ +S D E
Sbjct: 112 DEVVPETDYEDNNEEPKNDQNPVEIPDNSDSDDDEPMEISSKNPVTSIENPENSDSDDDE 171
Query: 518 PV--PKSAPNSRPQTPKTL 568
P+ AP PK++
Sbjct: 172 PMEATSKAPEMSVAEPKSI 190
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +2
Query: 299 KIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQM-VTVNSEEEMELKNEQT 475
+IE I D++ Q Y Q D H + ++ + + S E + ++
Sbjct: 14 QIEQI-DVEGQRAEYNRIQQERQDYQYAMRFAVHVDQVAVQALPIPAQSPEHLVAEHSNA 72
Query: 476 ALESDNKENSLDCEPVPKSAPNSRP-QTPKTL 568
+ D + N P P++AP+ P Q P+ L
Sbjct: 73 QVPVDARPNPPTQSPAPRAAPDHGPVQAPRNL 104
>AL021487-11|CAA16355.2| 330|Caenorhabditis elegans Hypothetical
protein Y45F10B.4 protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 524 VQVHNPKNFLYCQIQERFVRFSIPFLLQNLP*PFV 420
V +H P N + +I E+ +R+SIPF + P PF+
Sbjct: 138 VPIHYPLN--HKKINEKIIRYSIPF-IHLYPFPFI 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,034,608
Number of Sequences: 27780
Number of extensions: 335433
Number of successful extensions: 1223
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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