Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5m01
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.87 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.87 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 591 NVELRSSFKLCLISVSPRNNIGKQIALI 508
           N + R  F     S  PRN IGK+ A++
Sbjct: 432 NCQKRHPFAYLPFSAGPRNCIGKKFAML 459


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 591 NVELRSSFKLCLISVSPRNNIGKQIALI 508
           N + R  F     S  PRN IGK+ A++
Sbjct: 432 NCQKRHPFAYLPFSAGPRNCIGKKFAML 459


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 27/89 (30%), Positives = 39/89 (43%)
 Frame = +2

Query: 434 YPKDLQKRAVVNQRLYFDSASLYVKIRAICFPILFLGETEIKQSLKDDLNSTLSFLNQFL 613
           + +D+  RAVVNQ    +  S YV IR         G T +   LK ++    SF+  F+
Sbjct: 111 HSRDVNVRAVVNQYYEAEVVSEYV-IR---------GNTAV---LKCNIP---SFVADFV 154

Query: 614 EKTKWVAADHPTIADTSIYASMSSILAVG 700
               WV +D      T+ Y S   +L  G
Sbjct: 155 RVEAWVGSDGSLYNHTANYDSKYLVLPSG 183


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 643  PHNCRHIYLCI 675
            PHNC   Y C+
Sbjct: 1112 PHNCNAYYRCV 1122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,081
Number of Sequences: 336
Number of extensions: 4045
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)