Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5l24
         (633 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0572 - 30337572-30338107,30338209-30338422,30338505-303388...    28   5.4  
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363           27   9.4  
08_01_0779 - 7553278-7553631,7553765-7553977,7554132-7554617,755...    27   9.4  

>01_06_0572 -
           30337572-30338107,30338209-30338422,30338505-30338862,
           30338948-30339048,30339185-30339749,30340553-30340664,
           30341196-30341372,30341589-30341686,30341859-30341953,
           30342078-30342158
          Length = 778

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 414 GGESLAPISCSNRIPGSRSYGK 479
           GG+S +P SC+ +I G+R Y K
Sbjct: 177 GGDSFSPSSCNRKIIGARYYVK 198


>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
          Length = 394

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 403 CKFGEESHSPQYHAVTEFPEAEAMEKKGNEQTEK 504
           C    ESHS     V  F E E +E+  N+Q E+
Sbjct: 308 CTGSGESHSSDLFQVFSFEEIEILEEDENDQDEE 341


>08_01_0779 -
           7553278-7553631,7553765-7553977,7554132-7554617,
           7554729-7554796,7554918-7555215,7555288-7555364,
           7555703-7555874,7555951-7556021,7557371-7557392
          Length = 586

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 291 INAKLRRRPDKFPEYRG*RFY*FSAITEFQTYEKIFKMQVW 413
           ++++L  RPD   EY+  +F+   + TE   +  I K  VW
Sbjct: 328 VDSELYNRPDFVTEYKDAKFFVIKSYTEDHVHRSI-KYNVW 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,467,635
Number of Sequences: 37544
Number of extensions: 246288
Number of successful extensions: 486
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)