Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5l24
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81537-8|CAB04380.1|  343|Caenorhabditis elegans Hypothetical pr...    32   0.30 
Z93379-9|CAE11301.1|  354|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z99281-12|CAB16521.1|  649|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z74039-7|CAA98506.1|  290|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z81537-8|CAB04380.1|  343|Caenorhabditis elegans Hypothetical
           protein F41D3.9 protein.
          Length = 343

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -3

Query: 343 HPLYSGNLSGLRLSFAFISFTPKRSLKHLEFLSQNNSHY 227
           HP +   L GL +S AFI   P+R  KH EF   N S Y
Sbjct: 121 HPRHKYILYGLNMSEAFIEKLPQRD-KHFEFRVFNTSQY 158


>Z93379-9|CAE11301.1|  354|Caenorhabditis elegans Hypothetical
           protein F21H7.14 protein.
          Length = 354

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -1

Query: 456 EFCYCMILGRVTLLPKLAF*IFFHMFEIR*WLKINRIFIPYTLEICLACV*ASHLFLLPQ 277
           +F +C +     +LP L F     +F    W+ I        + I   CV +S+++LL  
Sbjct: 77  DFIFCTLSTTYVILPMLGF-FGVGVFS---WMGIPYSVQLAFIVITALCVASSYVYLLEG 132

Query: 276 KGHSNI*NSFR 244
           + HS + N FR
Sbjct: 133 RSHSLLQNKFR 143


>Z99281-12|CAB16521.1|  649|Caenorhabditis elegans Hypothetical
           protein Y57G11C.20 protein.
          Length = 649

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +1

Query: 343 EDSINFQPSPNFKHMKKYLKCKFGEESHSPQYHA-----VTEFPEAEAMEKKGNEQTEK 504
           +D+  +      KH++   K +  EE    +  A     V    +AEA+EKK  EQ EK
Sbjct: 196 QDNQKYHDEERKKHIETQKKAEENEEKRRAKEKADRDAHVARHKQAEALEKKKREQEEK 254


>Z74039-7|CAA98506.1|  290|Caenorhabditis elegans Hypothetical
           protein K03B8.7 protein.
          Length = 290

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 325 FQSIGDEDSINFQPSPNFKHMK 390
           F    DE++  FQP+P+F H K
Sbjct: 77  FADEDDEETSTFQPTPSFDHQK 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,497,049
Number of Sequences: 27780
Number of extensions: 242844
Number of successful extensions: 519
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)