Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5l18
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021420-1|AAX33568.1| 347|Drosophila melanogaster LD03728p pro... 173 1e-43
AF044220-1|AAD02322.1| 347|Drosophila melanogaster HCG-1 protein. 173 1e-43
AF044219-1|AAD02321.1| 347|Drosophila melanogaster HCG-1 protei... 173 1e-43
AE014298-2250|AAS65354.1| 347|Drosophila melanogaster CG9038-PB... 173 1e-43
AE014298-2249|AAF48527.1| 347|Drosophila melanogaster CG9038-PA... 173 1e-43
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 30 3.4
AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. 29 4.5
AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair p... 29 4.5
AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB, ... 29 4.5
AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, ... 29 4.5
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 29 7.9
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 29 7.9
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 29 7.9
>BT021420-1|AAX33568.1| 347|Drosophila melanogaster LD03728p
protein.
Length = 347
Score = 173 bits (422), Expect = 1e-43
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +1
Query: 286 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 465
+ IP DKINLRLILVSGKTKEF+FSP DSAGDIA V+DNWPE DW E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287
Query: 466 YQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHEVRWN 597
YQGRFLH +VTLGALGLPLG+TTVMHLVPR++LPEPNS + R N
Sbjct: 288 YQGRFLHCNVTLGALGLPLGKTTVMHLVPRDNLPEPNSQDQRQN 331
>AF044220-1|AAD02322.1| 347|Drosophila melanogaster HCG-1 protein.
Length = 347
Score = 173 bits (422), Expect = 1e-43
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +1
Query: 286 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 465
+ IP DKINLRLILVSGKTKEF+FSP DSAGDIA V+DNWPE DW E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287
Query: 466 YQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHEVRWN 597
YQGRFLH +VTLGALGLPLG+TTVMHLVPR++LPEPNS + R N
Sbjct: 288 YQGRFLHCNVTLGALGLPLGKTTVMHLVPRDNLPEPNSQDQRQN 331
>AF044219-1|AAD02321.1| 347|Drosophila melanogaster HCG-1 protein
protein.
Length = 347
Score = 173 bits (422), Expect = 1e-43
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +1
Query: 286 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 465
+ IP DKINLRLILVSGKTKEF+FSP DSAGDIA V+DNWPE DW E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287
Query: 466 YQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHEVRWN 597
YQGRFLH +VTLGALGLPLG+TTVMHLVPR++LPEPNS + R N
Sbjct: 288 YQGRFLHCNVTLGALGLPLGKTTVMHLVPRDNLPEPNSQDQRQN 331
>AE014298-2250|AAS65354.1| 347|Drosophila melanogaster CG9038-PB,
isoform B protein.
Length = 347
Score = 173 bits (422), Expect = 1e-43
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +1
Query: 286 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 465
+ IP DKINLRLILVSGKTKEF+FSP DSAGDIA V+DNWPE DW E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287
Query: 466 YQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHEVRWN 597
YQGRFLH +VTLGALGLPLG+TTVMHLVPR++LPEPNS + R N
Sbjct: 288 YQGRFLHCNVTLGALGLPLGKTTVMHLVPRDNLPEPNSQDQRQN 331
>AE014298-2249|AAF48527.1| 347|Drosophila melanogaster CG9038-PA,
isoform A protein.
Length = 347
Score = 173 bits (422), Expect = 1e-43
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +1
Query: 286 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 465
+ IP DKINLRLILVSGKTKEF+FSP DSAGDIA V+DNWPE DW E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287
Query: 466 YQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHEVRWN 597
YQGRFLH +VTLGALGLPLG+TTVMHLVPR++LPEPNS + R N
Sbjct: 288 YQGRFLHCNVTLGALGLPLGKTTVMHLVPRDNLPEPNSQDQRQN 331
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 29.9 bits (64), Expect = 3.4
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +2
Query: 347 SSSSVPSTRPATSHCTSTIIGPKLTGQRNACLAPRSCD*STRVASCTAR*L-WALSACP* 523
+S+S P+T S T++ GP T R+ SC +T S T + P
Sbjct: 886 TSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPR 945
Query: 524 GAPRSCT*CRANTS-RSLTLT 583
+CT C T+ RS T T
Sbjct: 946 STTTTCTSCPTTTTPRSTTTT 966
>AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein.
Length = 414
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 495 DSGRSRPAPRAHHGHAPSAARTPPGA*LSRSTMELKSNAIL 617
DS +S P A+H ++PS+ T LSR T L S+ ++
Sbjct: 98 DSKQSMPCEEANHTNSPSSTNTEDSV-LSRETRPLSSDELI 137
>AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair
protein Rad23 protein.
Length = 414
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 495 DSGRSRPAPRAHHGHAPSAARTPPGA*LSRSTMELKSNAIL 617
DS +S P A+H ++PS+ T LSR T L S+ ++
Sbjct: 98 DSKQSMPCEEANHTNSPSSTNTEDSV-LSRETRPLSSDELI 137
>AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB,
isoform B protein.
Length = 343
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 495 DSGRSRPAPRAHHGHAPSAARTPPGA*LSRSTMELKSNAIL 617
DS +S P A+H ++PS+ T LSR T L S+ ++
Sbjct: 27 DSKQSMPCEEANHTNSPSSTNTEDSV-LSRETRPLSSDELI 66
>AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA,
isoform A protein.
Length = 414
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 495 DSGRSRPAPRAHHGHAPSAARTPPGA*LSRSTMELKSNAIL 617
DS +S P A+H ++PS+ T LSR T L S+ ++
Sbjct: 98 DSKQSMPCEEANHTNSPSSTNTEDSV-LSRETRPLSSDELI 137
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 453 PATDLPGSLPAQLGDSGRSRPAPRAHHGHAPSAAR--TPPG 569
P +PG +P+ G+ GR P P G PS R PPG
Sbjct: 157 PPGMIPGGMPSMPGNMGRGAPPPM--RGPPPSMIRGAPPPG 195
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 453 PATDLPGSLPAQLGDSGRSRPAPRAHHGHAPSAAR--TPPG 569
P +PG +P+ G+ GR P P G PS R PPG
Sbjct: 157 PPGMIPGGMPSMPGNMGRGAPPPM--RGPPPSMIRGAPPPG 195
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 453 PATDLPGSLPAQLGDSGRSRPAPRAHHGHAPSAAR--TPPG 569
P +PG +P+ G+ GR P P G PS R PPG
Sbjct: 157 PPGMIPGGMPSMPGNMGRGAPPPM--RGPPPSMIRGAPPPG 195
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,819,866
Number of Sequences: 53049
Number of extensions: 724412
Number of successful extensions: 2443
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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