Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5l18
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81449-7|CAE17762.1| 121|Caenorhabditis elegans Hypothetical pr... 117 7e-27
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 31 1.0
CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical ... 31 1.0
EF090262-1|ABK78775.1| 120|Caenorhabditis elegans glycoprotein ... 30 1.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 4.1
AF067608-6|AAC17648.2| 194|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81449-7|CAE17762.1| 121|Caenorhabditis elegans Hypothetical
protein C46F11.6 protein.
Length = 121
Score = 117 bits (282), Expect = 7e-27
Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Frame = +1
Query: 277 MSAK---NIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRA 447
MSAK + +++ LRLILVSGKT EF F P+ SA D+ V+D WP+ +W + V A
Sbjct: 1 MSAKQSIDSQAERVVLRLILVSGKTHEFEFHPLTSAHDVTQMVFDQWPD-EWYEDKVQSA 59
Query: 448 EILRLIYQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHE 585
++L+LIY GRFLH SVTL AL L G+TTVMHLV RE+LPEPNS E
Sbjct: 60 QMLKLIYHGRFLHGSVTLHALQLMPGKTTVMHLVTRENLPEPNSSE 105
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 275 QCRQKIYPEIRSTYD*SWFPERRKSSSSVPSTRPATSHCTST 400
Q + YP + ST++ +P+ + +S PST +T+ T+T
Sbjct: 178 QSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTT 219
>CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical
protein C42C1.9 protein.
Length = 252
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +1
Query: 337 KTKEFVFSPVDSAGDIALHV--YDNWPEADWATECVSR--AEILRLIYQGRFLHSSVTLG 504
KT + S +++ + ++ Y +P DW T + R A L ++ + LH +VTL
Sbjct: 83 KTSHVITSTLNTEKSLETYLDEYGKFPLPDWMTAVIVRDIANALLQLHSNQVLHGAVTLE 142
Query: 505 ALGLPLGRTTVMHLVPREHLPEPNSHEV 588
+ L + L R H + S ++
Sbjct: 143 NIFLMKDEPSFCLLTSRSHARKMESDKI 170
>EF090262-1|ABK78775.1| 120|Caenorhabditis elegans glycoprotein
hormone alpha 2 protein.
Length = 120
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = +2
Query: 32 CEKLLVLMNINGKSC*LRLQTMGRLLCLCF*YIFRAVMMAK*FGRVKCLCRMLGSHGCSE 211
C+K+ V IN K C L + + R CF + F + K KC CRM+ E
Sbjct: 36 CKKVGVEELINEKGCDLMIIRINRCRGHCFSFTFPNPLTKKYSVHAKC-CRMVE----WE 90
Query: 212 ILSLDKSCATRRRITEKEADTQC 280
+L + C+ R + TQC
Sbjct: 91 MLETELKCSKGNRNLRIPSATQC 113
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 332 PERRKSSSSVPSTRPATSHCTSTIIGPKLTG 424
P+ SS+SVPS+ ATS +ST +G G
Sbjct: 1508 PQPTVSSTSVPSSTGATSSGSSTTVGSSTVG 1538
>AF067608-6|AAC17648.2| 194|Caenorhabditis elegans Hypothetical
protein B0511.9a protein.
Length = 194
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 374 PATSHCTSTIIGPKLTGQRNACLAP 448
P+T CT T I P LT R AP
Sbjct: 76 PSTGECTRTSIAPTLTSARTPVAAP 100
>Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 453 PATDLPGSLPAQLGDSGRSRPAPRAHHGHAPSAARTP 563
PAT L P+ + +P PR APSA P
Sbjct: 782 PATPLSSPAPSNQSPPSQPQPGPRGSSPPAPSAPSAP 818
>Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 453 PATDLPGSLPAQLGDSGRSRPAPRAHHGHAPSAARTP 563
PAT L P+ + +P PR APSA P
Sbjct: 782 PATPLSSPAPSNQSPPSQPQPGPRGSSPPAPSAPSAP 818
>Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical
protein R07B1.9 protein.
Length = 770
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 520 GAGRERP-ESPSCAGSDPGRSVAGSRRETRI 431
G+G +P +SP+ G DP R V S +T+I
Sbjct: 734 GSGSGQPGQSPANVGDDPNRMVQSSASQTQI 764
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 453 PATDLPGSLPAQLGDSGRSRPAPRAHHGHAPSAARTPPGA*LSRSTMELKSNAI 614
PA SL G S P+PR PS PP A + S +E + A+
Sbjct: 317 PANKTVQSLQGLQGSSRTMSPSPRNIRSTTPSVPSRPPSALSTHSHVETEVAAV 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,202,627
Number of Sequences: 27780
Number of extensions: 358786
Number of successful extensions: 1111
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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