Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5l16
(590 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 46 3e-06
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 45 7e-06
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 42 9e-05
SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3 |Schi... 40 2e-04
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 40 2e-04
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 38 0.001
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 36 0.006
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 35 0.010
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb... 34 0.013
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 33 0.041
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 31 0.095
SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 31 0.13
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 29 0.38
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 29 0.38
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 29 0.51
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 29 0.67
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 28 1.2
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 28 1.2
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 2.7
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 26 3.6
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 26 3.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 3.6
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 26 4.7
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 25 8.3
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 46.4 bits (105), Expect = 3e-06
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCRANTFKVDFAKKADNTS 358
C IC + P L C H FC CL ++ K DF CPLCRA ++ D+ +
Sbjct: 360 CAICSNVAYKPVRLGCSHVFCLHCLIIL--QKQKVDF--CPLCRAKEVMKADSRNIDH-A 414
Query: 359 TEDFRRTFNPRD 394
+F +T+ PR+
Sbjct: 415 LMNFMKTYFPRE 426
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 45.2 bits (102), Expect = 7e-06
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCRANTFKVDFAKKADNTS 358
C+IC + DP CGH FC CL Q + + CP CR + A + S
Sbjct: 169 CQICFGMLYDPVVSPCGHTFCGPCLMQALTQSPQ-----CPTCRFGLPSPVVLEHAKSHS 223
Query: 359 TEDFRRTFNPRDKLE 403
F R F P + LE
Sbjct: 224 ITTFLRDFYPDNWLE 238
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 41.5 bits (93), Expect = 9e-05
Identities = 24/70 (34%), Positives = 29/70 (41%)
Frame = +2
Query: 122 AQLSQGSRTSIKSSYEPSSCRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCP 301
A+L +G + K P C IC P A TCGH FCE+C + R I C
Sbjct: 235 AKLEEGMVKNEKKEDIPFVCLICKKDYRSPIATTCGHHFCEQCAITRY--RKTPTCIQCG 292
Query: 302 LCRANTFKVD 331
F VD
Sbjct: 293 ADTKGLFSVD 302
>SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCRA 313
C +C+ I PAA CGH FC C+ + ++ + CPLCRA
Sbjct: 256 CSLCMEFIHCPAATECGHIFCWSCINGWTSKKSE-----CPLCRA 295
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 40.3 bits (90), Expect = 2e-04
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCRANTFKVD---FAKKAD 349
C IC I TCGH +C CL + W + + CP+C+ K + + D
Sbjct: 1092 CIICRDIIKQGFITTCGHLYCSFCL-EAWLKHSSS----CPMCKTKLNKNNAYYIGESRD 1146
Query: 350 NTSTEDFRRTFNPRD-KLEISQPQA 421
S ++F FN RD +LEI +A
Sbjct: 1147 IYSRQEFVTGFNKRDERLEILDDEA 1171
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Frame = +2
Query: 176 SCRICLSTIIDPA-ALTCGHRFCERCLC-----QYWDERDKTDFIVCPLCRANTFKVDFA 337
+C +CL + P + CGH C+ C+ +Y T CP+CR N +
Sbjct: 605 NCSVCLDPCLAPVFIIPCGHFTCQECMSMLVGQKYGSSSTSTIIAKCPMCRGNIVQDSL- 663
Query: 338 KKADNTSTEDFRRTFNPRDKLEISQPQ--AEVHSITGLW 448
D T + N +LE+ Q +E SI W
Sbjct: 664 --VDATILQAIHGPLNSLKQLELDMNQSFSEQESIKLRW 700
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 35.5 bits (78), Expect = 0.006
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCRANTF 322
C IC + P CGH +C CL W + K+ CP CR +
Sbjct: 85 CPICTEALQRPFTTHCGHTYCYECLLN-WLKESKS----CPTCRQKLY 127
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 34.7 bits (76), Expect = 0.010
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCRANTFKVDFAKKA-DNT 355
C+IC D C H FC C+ +Y + + + CP C +D + A ++
Sbjct: 711 CKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFI-PLSIDLSAPALEDF 769
Query: 356 STEDFR 373
S E F+
Sbjct: 770 SEEKFK 775
>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 34.3 bits (75), Expect = 0.013
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +2
Query: 149 SIKSSYEPSSCRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCRA 313
S+K C IC P +C H FC C+ Y E +CP CRA
Sbjct: 19 SLKGLDSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLREHP-----MCPACRA 68
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 32.7 bits (71), Expect = 0.041
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 164 YEPSSCRICLSTIIDP---AALTCGHRFCERCLCQYWDERDKTDFIVCPLCRANTFKVD 331
++ SS +S+ +D A + CGH F CL + W T CPLCR KVD
Sbjct: 33 WDSSSVPASISSTLDGLRIAKIPCGHYFHNHCL-ESWCRVANT----CPLCRTEFLKVD 86
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 31.5 bits (68), Expect = 0.095
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLCR 310
C ICL + + + CGH FC C+ T CP+CR
Sbjct: 206 CVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQ--KCPVCR 247
>SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 311
Score = 31.1 bits (67), Expect = 0.13
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERCLCQYWDER 274
C+IC I +PA L+ G FC C+ Q W +R
Sbjct: 257 CKICGEKIKNPAVLSTGFVFCYPCI-QVWLQR 287
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 29.5 bits (63), Expect = 0.38
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 179 CRIC-LSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLC 307
C +C S CGH FC C+ +++ + T CP C
Sbjct: 639 CSVCNFSNWKSKLIPNCGHAFCSNCMEPFYEHKTST----CPQC 678
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 29.5 bits (63), Expect = 0.38
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 173 SSCRICLSTII-DPAALTCGHRFCERCLCQYWDERDKTDFIVCPLC 307
+ C IC + I +P L C H C CL ++ + + + I+ PLC
Sbjct: 875 TECPICCNEPIQNPLLLNCKHACCGDCLSEHIQYQKRRN-IIPPLC 919
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 29.1 bits (62), Expect = 0.51
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 164 YEPSSCRICLSTIIDPA-ALTCGHRFCERCLCQYWDER--DKTDFIVCP 301
+ +C IC P + C H FC C QY D R + I CP
Sbjct: 126 HHEGTCEICYDEGCLPFFSAECDHEFCLACYRQYLDSRISEGESVIQCP 174
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 28.7 bits (61), Expect = 0.67
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 337 SEINFKS--VSSAQRANYEVRFVSLVPVLAQAALAEPV 230
+E+ +K S A RAN L P LA+A LA+PV
Sbjct: 353 AELAYKEDLTSLASRANISDNSTGLTPTLAKATLAQPV 390
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 140 SRTSIKSSYEPSSCRIC-LSTIIDPAALTCGHRFCERCLCQYWDERDKTDFIVCPLC 307
S +K+ C +C D CGH FC +C+ + + R + CP+C
Sbjct: 614 SAEELKTFRAMCKCSVCNFERWKDRIISLCGHGFCYQCIQKRIETRQRR----CPIC 666
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +2
Query: 179 CRICLSTIIDPAAL------TCGHRFCERCLCQYWDERDKTDFIVCPLCRAN 316
C IC S + L TC H+F CL +++ + + CPLCR++
Sbjct: 1558 CAICYSVLSVERTLPNKRCGTCRHKFHASCLYKWFKSSNSSR---CPLCRSS 1606
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 158 SSYEPSSCRICLSTIIDPAALT-CGHRFCERCLCQY 262
S ++ ++C CL A ++ CGH +C CL ++
Sbjct: 207 SDFQLAACPFCLEEKPVAARMSRCGHVYCFSCLLRF 242
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 167 EPSSCRICLSTIIDPAALT-CGHRFCERCL 253
E C +C+ + + + CGH C CL
Sbjct: 742 ETLQCSLCMDVVAELLIIVPCGHFLCRECL 771
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 227 GHRFCERCLCQYWDERDKTDFIVCPLCRANTF 322
G R C LC W+E + F C CR +
Sbjct: 476 GIRRCANLLCNKWEEHSR-QFAKCRRCRRTKY 506
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 179 CRICLSTIIDPAALTCGHRFCERC 250
C IC I L C HR C C
Sbjct: 81 CFICAEGITYSCVLPCNHRMCHVC 104
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/60 (25%), Positives = 34/60 (56%)
Frame = -3
Query: 414 GCEISSLSLGLNVLLKSSVDVLSAFLAKSTLKVLARHNGQTMKSVLSLSSQYWHKQRSQN 235
G ++ +L ++ L++SV AF+A + +++G+T+KS++ +SQ + +N
Sbjct: 216 GAILAFAALSIDTELRNSV---RAFIALAPAIAPKKYSGRTVKSIIHANSQLLYLMFGRN 272
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 990
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 405 ISSLSLGLNVLLKSSVDVLSAFLAKSTLKVLARHNGQTMKSVLSLSSQYWHKQRSQN 235
IS ++ + LL + D ++A + K+L G +S L L S K ++QN
Sbjct: 869 ISFITSEKSDLLNTHTDFVNAIRSPLIAKILLGFGGNASRSSLPLLSDILGKLKAQN 925
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,289,285
Number of Sequences: 5004
Number of extensions: 45683
Number of successful extensions: 180
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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