Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5l16
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    40   8e-05
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    40   8e-05
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.45 
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         25   2.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.8  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 39.5 bits (88), Expect = 8e-05
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 170 PSSCRICLSTIIDPAALTCGHRFCERC-LCQY 262
           P  C +C  + +DP    C H FCERC L QY
Sbjct: 244 PFKCYVCRESFVDPIVTKCKHYFCERCALAQY 275


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 39.5 bits (88), Expect = 8e-05
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 170 PSSCRICLSTIIDPAALTCGHRFCERC-LCQY 262
           P  C +C  + +DP    C H FCERC L QY
Sbjct: 244 PFKCYVCRESFVDPIVTKCKHYFCERCALAQY 275


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 27.1 bits (57), Expect = 0.45
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -3

Query: 330 STLKVLARHNGQTMKSVLSLSSQYWHKQRSQNLCPQVKAAGSMMVDKQIRQLLGSYDDL 154
           +++ VLA HN +++  + S + Q   +Q+S    P       +   KQ +QL    D L
Sbjct: 363 NSVDVLAVHNAKSVSPLPSYTQQQQQQQQSAAAPPSYWKQKKLPTKKQHKQLQAQLDKL 421


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 25  GNCLKIVEM*KKNTVIQKNVRIKSQFVGEEPNRATE 132
           GNC  I+ + +KN   ++N+ ++   +G    R TE
Sbjct: 131 GNCTVIIALLQKNRRSRRNMGVECLTIGFAVYRVTE 166


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 140  ILDSVARFGSSPTNWLLIRTFFCITVFFF 54
            + + + R GSS   WL +   +C+   FF
Sbjct: 1531 LFELLVRNGSSGERWLRLHDLYCLNRPFF 1559


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +2

Query: 443 LWTRFSILMPIIYCLIKLLKGPIIGFYNFVRFKIN 547
           +W  + +L+ II+C +  + G +I      RF+I+
Sbjct: 554 VWNTWFVLLTIIFCSVYRILGVLILSALANRFRIH 588


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 252 KQRSQNLCPQVKAAGSMMVDKQIRQ 178
           K  +QN+C Q  A   M+  +Q R+
Sbjct: 298 KSSAQNICNQYSANSIMVTGRQARR 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,395
Number of Sequences: 2352
Number of extensions: 11923
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)