Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5l07
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    64   4e-12
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   3.3  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 64.1 bits (149), Expect = 4e-12
 Identities = 34/140 (24%), Positives = 75/140 (53%)
 Frame = +2

Query: 320 QDDSRAKSILVQCLSDKYIYIVKNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYD 499
           + D++A++ +   + D    ++++  T K    +L+   ++ T+  K  L +KL    YD
Sbjct: 50  EGDAKARATIALLVDDCQHPLIRDCKTAKGTWDALQKHHQKTTMSTKVSLLKKLCKAEYD 109

Query: 500 DESNLQQFFLKFEGILSELAAINVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLN 679
           +  +++    + + + S L      ++   ++  +L S+P+ YD L T++ET  S+  L 
Sbjct: 110 ESGDMEAHLFRMDELFSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETR-SDDDLT 168

Query: 680 IEFVKARLLDMETXLKMDRN 739
           +E VK++LLD E   +M+++
Sbjct: 169 MELVKSKLLD-EAQKRMEKS 187


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 344 ILVQCLSDKYIYIVKNANTTKEMLTSLEAIFER 442
           ILV  + D YIY++   +   ++ T +  +F R
Sbjct: 403 ILVHFMLDPYIYVLLKKSRRSDLRTMIRYMFSR 435


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,099
Number of Sequences: 2352
Number of extensions: 11938
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)