Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5l07
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X54147-1|CAA38086.1|  426|Drosophila melanogaster VLP protein pr...   108   7e-24
X13719-1|CAA31997.1|  426|Drosophila melanogaster protein ( Dros...   108   7e-24
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p...   108   7e-24
X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein ( Dros...   108   7e-24
X02599-2|CAA26445.1|  426|Drosophila melanogaster ORF protein.        108   7e-24
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot...   108   7e-24
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro...   108   7e-24
X07656-1|CAA30502.1|  273|Drosophila melanogaster protein ( Dros...    42   0.001

>X54147-1|CAA38086.1|  426|Drosophila melanogaster VLP protein
           protein.
          Length = 426

 Score =  108 bits (260), Expect = 7e-24
 Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +2

Query: 224 ENSNFSHWKFRXXXXXXXXXXSNVFLKEKPTDQDDSR------AKSILVQCLSDKYIYIV 385
           +   ++ WKFR            V     P + DDS       AKS +++ LSD ++   
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFA 71

Query: 386 KNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYDDESNLQQFFLKFEGILSELAAI 565
            +  T +++L +L+A++ERK++ ++  L+++L+++    E +L   F  F+ ++SEL A 
Sbjct: 72  TSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAA 131

Query: 566 NVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLNIEFVKARLLDMETXLKMDRN 739
              +E  D+I +LL +LP  YD +IT+IET+ SE+ L + FVK RLLD E  +K D N
Sbjct: 132 GAKIEEMDKISHLLITLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHN 188


>X13719-1|CAA31997.1|  426|Drosophila melanogaster protein (
           Drosophila melanogastercopia-specific 2.1-kb mRNA for
           31-kD copia  protein and17-kD viral protease.  ).
          Length = 426

 Score =  108 bits (260), Expect = 7e-24
 Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +2

Query: 224 ENSNFSHWKFRXXXXXXXXXXSNVFLKEKPTDQDDSR------AKSILVQCLSDKYIYIV 385
           +   ++ WKFR            V     P + DDS       AKS +++ LSD ++   
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFA 71

Query: 386 KNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYDDESNLQQFFLKFEGILSELAAI 565
            +  T +++L +L+A++ERK++ ++  L+++L+++    E +L   F  F+ ++SEL A 
Sbjct: 72  TSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAA 131

Query: 566 NVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLNIEFVKARLLDMETXLKMDRN 739
              +E  D+I +LL +LP  YD +IT+IET+ SE+ L + FVK RLLD E  +K D N
Sbjct: 132 GAKIEEMDKISHLLITLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHN 188


>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1409

 Score =  108 bits (260), Expect = 7e-24
 Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +2

Query: 224 ENSNFSHWKFRXXXXXXXXXXSNVFLKEKPTDQDDSR------AKSILVQCLSDKYIYIV 385
           +   ++ WKFR            V     P + DDS       AKS +++ LSD ++   
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFA 71

Query: 386 KNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYDDESNLQQFFLKFEGILSELAAI 565
            +  T +++L +L+A++ERK++ ++  L+++L+++    E +L   F  F+ ++SEL A 
Sbjct: 72  TSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAA 131

Query: 566 NVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLNIEFVKARLLDMETXLKMDRN 739
              +E  D+I +LL +LP  YD +IT+IET+ SE+ L + FVK RLLD E  +K D N
Sbjct: 132 GAKIEEMDKISHLLITLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHN 188


>X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein (
           Drosophila melanogastervirus like particle RNA (VLP
           H-RNA). ).
          Length = 1288

 Score =  108 bits (260), Expect = 7e-24
 Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +2

Query: 224 ENSNFSHWKFRXXXXXXXXXXSNVFLKEKPTDQDDSR------AKSILVQCLSDKYIYIV 385
           +   ++ WKFR            V     P + DDS       AKS +++ LSD ++   
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFA 71

Query: 386 KNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYDDESNLQQFFLKFEGILSELAAI 565
            +  T +++L +L+A++ERK++ ++  L+++L+++    E +L   F  F+ ++SEL A 
Sbjct: 72  TSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAA 131

Query: 566 NVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLNIEFVKARLLDMETXLKMDRN 739
              +E  D+I +LL +LP  YD +IT+IET+ SE+ L + FVK RLLD E  +K D N
Sbjct: 132 GAKIEEMDKISHLLITLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHN 188


>X02599-2|CAA26445.1|  426|Drosophila melanogaster ORF protein.
          Length = 426

 Score =  108 bits (260), Expect = 7e-24
 Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +2

Query: 224 ENSNFSHWKFRXXXXXXXXXXSNVFLKEKPTDQDDSR------AKSILVQCLSDKYIYIV 385
           +   ++ WKFR            V     P + DDS       AKS +++ LSD ++   
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFA 71

Query: 386 KNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYDDESNLQQFFLKFEGILSELAAI 565
            +  T +++L +L+A++ERK++ ++  L+++L+++    E +L   F  F+ ++SEL A 
Sbjct: 72  TSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAA 131

Query: 566 NVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLNIEFVKARLLDMETXLKMDRN 739
              +E  D+I +LL +LP  YD +IT+IET+ SE+ L + FVK RLLD E  +K D N
Sbjct: 132 GAKIEEMDKISHLLITLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHN 188


>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
           protein.
          Length = 1409

 Score =  108 bits (260), Expect = 7e-24
 Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +2

Query: 224 ENSNFSHWKFRXXXXXXXXXXSNVFLKEKPTDQDDSR------AKSILVQCLSDKYIYIV 385
           +   ++ WKFR            V     P + DDS       AKS +++ LSD ++   
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFA 71

Query: 386 KNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYDDESNLQQFFLKFEGILSELAAI 565
            +  T +++L +L+A++ERK++ ++  L+++L+++    E +L   F  F+ ++SEL A 
Sbjct: 72  TSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAA 131

Query: 566 NVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLNIEFVKARLLDMETXLKMDRN 739
              +E  D+I +LL +LP  YD +IT+IET+ SE+ L + FVK RLLD E  +K D N
Sbjct: 132 GAKIEEMDKISHLLITLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHN 188


>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p
           protein.
          Length = 1409

 Score =  108 bits (260), Expect = 7e-24
 Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +2

Query: 224 ENSNFSHWKFRXXXXXXXXXXSNVFLKEKPTDQDDSR------AKSILVQCLSDKYIYIV 385
           +   ++ WKFR            V     P + DDS       AKS +++ LSD ++   
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFA 71

Query: 386 KNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYDDESNLQQFFLKFEGILSELAAI 565
            +  T +++L +L+A++ERK++ ++  L+++L+++    E +L   F  F+ ++SEL A 
Sbjct: 72  TSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAA 131

Query: 566 NVSVEVEDQICYLLSSLPKIYDQLITSIETMGSEKQLNIEFVKARLLDMETXLKMDRN 739
              +E  D+I +LL +LP  YD +IT+IET+ SE+ L + FVK RLLD E  +K D N
Sbjct: 132 GAKIEEMDKISHLLITLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHN 188


>X07656-1|CAA30502.1|  273|Drosophila melanogaster protein (
           Drosophila melanogasterretrotransposon 1731 sequence. ).
          Length = 273

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 27/112 (24%), Positives = 53/112 (47%)
 Frame = +2

Query: 320 QDDSRAKSILVQCLSDKYIYIVKNANTTKEMLTSLEAIFERKTVCNKFYLKRKLITMCYD 499
           QD+    +I++   S +  Y VK   T  E    L+ + + K       L +KL++    
Sbjct: 53  QDEKALATIILSVKSSQLGY-VKGCLTAAEAWKVLQDVHQPKGPLRTVMLYKKLLSKRLL 111

Query: 500 DESNLQQFFLKFEGILSELAAINVSVEVEDQICYLLSSLPKIYDQLITSIET 655
           +  ++     +F+ I   L A+ + +  + +   LLSSLP+ ++  + +IET
Sbjct: 112 EGQSISSHIKEFKEIFDALDAVEIGITEKLRSVVLLSSLPESFENFVVAIET 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,595,426
Number of Sequences: 53049
Number of extensions: 492364
Number of successful extensions: 976
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)