Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5l05
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23168-6|AAP86623.1|  114|Caenorhabditis elegans Hypothetical pr...    38   0.010
DQ241300-1|ABB45864.1|  114|Caenorhabditis elegans TRX-1b protein.     38   0.010
U23168-7|AAC38808.1|  115|Caenorhabditis elegans Hypothetical pr...    36   0.041
DQ241299-1|ABB45863.1|  115|Caenorhabditis elegans TRX-1a protein.     36   0.041
U64857-4|AAN84850.1|  356|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U53339-2|AAA96198.2|  542|Caenorhabditis elegans Nematode astaci...    29   4.7  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    29   4.7  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   4.7  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   4.7  
Z69634-2|CAA93451.2|  926|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z68297-6|CAE45045.1|  302|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>U23168-6|AAP86623.1|  114|Caenorhabditis elegans Hypothetical
           protein B0228.5b protein.
          Length = 114

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +2

Query: 38  IEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSD 217
           +E+ +  +F+ ++R H E +I  + Y+ + G C A+  L+   +   ++  II  KV  D
Sbjct: 9   LELADMSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYK--ELATTHKGIIFCKVDVD 66

Query: 218 EVDSL-RRFRDQSEPVYLF 271
           E + L  ++  +  P ++F
Sbjct: 67  EAEDLCSKYDVKMMPTFIF 85


>DQ241300-1|ABB45864.1|  114|Caenorhabditis elegans TRX-1b protein.
          Length = 114

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +2

Query: 38  IEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSD 217
           +E+ +  +F+ ++R H E +I  + Y+ + G C A+  L+   +   ++  II  KV  D
Sbjct: 9   LELADMSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYK--ELATTHKGIIFCKVDVD 66

Query: 218 EVDSL-RRFRDQSEPVYLF 271
           E + L  ++  +  P ++F
Sbjct: 67  EAEDLCSKYDVKMMPTFIF 85


>U23168-7|AAC38808.1|  115|Caenorhabditis elegans Hypothetical
           protein B0228.5a protein.
          Length = 115

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 53  EKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSDEVDSL 232
           + +F+ ++R H E +I  + Y+ + G C A+  L+   +   ++  II  KV  DE + L
Sbjct: 15  QSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYK--ELATTHKGIIFCKVDVDEAEDL 72

Query: 233 -RRFRDQSEPVYLF 271
             ++  +  P ++F
Sbjct: 73  CSKYDVKMMPTFIF 86


>DQ241299-1|ABB45863.1|  115|Caenorhabditis elegans TRX-1a protein.
          Length = 115

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 53  EKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSDEVDSL 232
           + +F+ ++R H E +I  + Y+ + G C A+  L+   +   ++  II  KV  DE + L
Sbjct: 15  QSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYK--ELATTHKGIIFCKVDVDEAEDL 72

Query: 233 -RRFRDQSEPVYLF 271
             ++  +  P ++F
Sbjct: 73  CSKYDVKMMPTFIF 86


>U64857-4|AAN84850.1|  356|Caenorhabditis elegans Hypothetical
           protein C37C3.7 protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 296 SMEKELEVAAQHDRRVARQAARKRHRAELMVPHLERINFVLFWPHCKHAHPELYEQ 463
           S +K +E AA+H ++V +    +     + V  L  + FV F   C H +    +Q
Sbjct: 225 SKKKHIEKAAEHRQKVKKGIRNRLRIIAICVAALSVVAFVAFMGRCMHKNATTAKQ 280


>U53339-2|AAA96198.2|  542|Caenorhabditis elegans Nematode astacin
           protease protein29 protein.
          Length = 542

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 512 MKEKAEDILYEGDAPINEASMQMLVSGT 595
           + +K  DIL+EGD  I+   + M+V+G+
Sbjct: 91  LNKKYRDILFEGDMAISYKQLSMIVNGS 118


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 431  CKHAHPELYEQWDLNGIIMIGREELNLMKEKAEDIL-YEGDAPINEASMQMLVSGT 595
            CK + P    +W  NG++++  E++N+     E +L      P N+ +  +L+ G+
Sbjct: 8767 CKTSQPISDAKWFCNGMVLLPDEQVNMTVTGCEAVLRLVKFLPQNKGNYHVLIDGS 8822


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 431  CKHAHPELYEQWDLNGIIMIGREELNLMKEKAEDIL-YEGDAPINEASMQMLVSGT 595
            CK + P    +W  NG++++  E++N+     E +L      P N+ +  +L+ G+
Sbjct: 8787 CKTSQPISDAKWFCNGMVLLPDEQVNMTVTGCEAVLRLVKFLPQNKGNYHVLIDGS 8842


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 431  CKHAHPELYEQWDLNGIIMIGREELNLMKEKAEDIL-YEGDAPINEASMQMLVSGT 595
            CK + P    +W  NG++++  E++N+     E +L      P N+ +  +L+ G+
Sbjct: 8787 CKTSQPISDAKWFCNGMVLLPDEQVNMTVTGCEAVLRLVKFLPQNKGNYHVLIDGS 8842


>Z69634-2|CAA93451.2|  926|Caenorhabditis elegans Hypothetical
           protein B0001.2 protein.
          Length = 926

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 8   KMAKRKIDLFIEIK---NEKEFKNILRTHSEALICAEVYSQFVGACTAL 145
           KM  + ID   +I+   ++++  N+ RT    +    +YSQFV  C  L
Sbjct: 851 KMENQDIDEVFKIEKNDSDRQVNNLFRTKLTCMPSETIYSQFVQVCKIL 899


>Z68297-6|CAE45045.1|  302|Caenorhabditis elegans Hypothetical
           protein F11A10.8 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +2

Query: 284 FNKLSMEKELEVAAQHDRRVARQA--ARKRHRAELMVPHLERINFVLFWPHCKHAHP 448
           F  +  E +++    +DR   R     + RHR   + P+     F L  P C++AHP
Sbjct: 126 FRHIDPETKMKDCPWYDRGFCRHGPYCKHRHRRRAVCPNY-LAGFCLQGPDCQYAHP 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,645,076
Number of Sequences: 27780
Number of extensions: 335194
Number of successful extensions: 992
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)