Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5l01
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006730-1|AAP35376.1| 206|Homo sapiens MRE11 meiotic recombina... 228 1e-59
BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic recombina... 228 1e-59
BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for IM... 228 1e-59
BC005241-1|AAH05241.1| 206|Homo sapiens MRE11A protein protein. 228 1e-59
AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic recombina... 228 1e-59
AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 1... 228 1e-59
AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11 ... 228 1e-59
AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and r... 228 1e-59
U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11 pr... 227 4e-59
M34059-1|AAA35952.1| 175|Homo sapiens protein ( Human beta-glob... 31 3.1
D88575-1|BAA31232.1| 380|Homo sapiens TP55 protein. 31 3.1
BC106744-1|AAI06745.1| 380|Homo sapiens serpin peptidase inhibi... 31 3.1
BC106743-1|AAI06744.1| 380|Homo sapiens serpin peptidase inhibi... 31 3.1
BC069547-1|AAH69547.1| 380|Homo sapiens serpin peptidase inhibi... 31 3.1
BC069442-1|AAH69442.1| 380|Homo sapiens serpin peptidase inhibi... 31 3.1
BC069417-1|AAH69417.1| 380|Homo sapiens serpin peptidase inhibi... 31 3.1
AF027866-1|AAC64506.1| 380|Homo sapiens megsin protein. 31 3.1
J04088-1|AAA61209.1| 1531|Homo sapiens TOP2A protein. 31 4.1
AJ011741-1|CAA09762.1| 1531|Homo sapiens topoisomerase II alpha ... 31 4.1
AF071747-1|AAC77388.1| 1531|Homo sapiens topoisomerase II alpha ... 31 4.1
U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein. 30 7.2
BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein. 30 7.2
BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein. 30 7.2
>BT006730-1|AAP35376.1| 206|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 206
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for
IMAGE:4687479) protein.
Length = 517
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>BC005241-1|AAH05241.1| 206|Homo sapiens MRE11A protein protein.
Length = 206
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 11
protein.
Length = 708
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11
protein.
Length = 708
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and
repair protein protein.
Length = 708
Score = 228 bits (558), Expect = 1e-59
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11
protein.
Length = 680
Score = 227 bits (554), Expect = 4e-59
Identities = 106/195 (54%), Positives = 138/195 (70%), Gaps = 4/195 (2%)
Frame = +3
Query: 141 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 320
A ++T +IL+A+DIHLGFME D RG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAARGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 321 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 488
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 489 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 668
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 669 DQRLSRLFAEKKVEM 713
D+RL R+F KKV M
Sbjct: 186 DERLYRMFVNKKVTM 200
>M34059-1|AAA35952.1| 175|Homo sapiens protein ( Human beta-globin
gene from a thalassemia patient, complete cds. ).
Length = 175
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 610 GDILTCV*SVHLPK*LTNPVIERISRELTLPWPT 509
G++L CV + H K T PV +S +PWPT
Sbjct: 108 GNVLVCVLAHHFGKEFTPPVQPHLSVVWLMPWPT 141
>D88575-1|BAA31232.1| 380|Homo sapiens TP55 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 575
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 576 KW 581
KW
Sbjct: 180 KW 181
>BC106744-1|AAI06745.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 575
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 576 KW 581
KW
Sbjct: 180 KW 181
>BC106743-1|AAI06744.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 575
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 576 KW 581
KW
Sbjct: 180 KW 181
>BC069547-1|AAH69547.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 575
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 576 KW 581
KW
Sbjct: 180 KW 181
>BC069442-1|AAH69442.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 575
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 576 KW 581
KW
Sbjct: 180 KW 181
>BC069417-1|AAH69417.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 575
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 576 KW 581
KW
Sbjct: 180 KW 181
>AF027866-1|AAC64506.1| 380|Homo sapiens megsin protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 575
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 576 KW 581
KW
Sbjct: 180 KW 181
>J04088-1|AAA61209.1| 1531|Homo sapiens TOP2A protein.
Length = 1531
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 172 NILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 53
++ +SS H EMS + I+ + ++ V SNNLN + PIG
Sbjct: 750 SVAEMSSYHHGEMSLMMTIINLAQNF-VGSNNLNLLQPIG 788
>AJ011741-1|CAA09762.1| 1531|Homo sapiens topoisomerase II alpha
protein.
Length = 1531
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 172 NILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 53
++ +SS H EMS + I+ + ++ V SNNLN + PIG
Sbjct: 750 SVAEMSSYHHGEMSLMMTIINLAQNF-VGSNNLNLLQPIG 788
>AF071747-1|AAC77388.1| 1531|Homo sapiens topoisomerase II alpha
protein.
Length = 1531
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 172 NILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 53
++ +SS H EMS + I+ + ++ V SNNLN + PIG
Sbjct: 750 SVAEMSSYHHGEMSLMMTIINLAQNF-VGSNNLNLLQPIG 788
>U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein.
Length = 517
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 298 PKSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR 191
P + + +T S ++K SSPRT SF MKP+
Sbjct: 346 PSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPK 381
>BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 298 PKSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR 191
P + + +T S ++K SSPRT SF MKP+
Sbjct: 346 PSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPK 381
>BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 298 PKSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR 191
P + + +T S ++K SSPRT SF MKP+
Sbjct: 346 PSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPK 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,102,415
Number of Sequences: 237096
Number of extensions: 1999278
Number of successful extensions: 7199
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7190
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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