Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5l01
(718 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132144-1|AAD33591.1| 620|Drosophila melanogaster endo/exonucl... 253 2e-67
AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-P... 253 2e-67
AF201919-1|AAF71697.1| 97|Drosophila melanogaster CRC-D protein. 31 2.1
AE014296-3491|AAF51688.1| 523|Drosophila melanogaster CG10510-P... 31 2.1
AE014134-3388|ABC65922.1| 105|Drosophila melanogaster CG8669-PD... 31 2.1
AY058403-1|AAL13632.1| 523|Drosophila melanogaster GH17186p pro... 30 3.6
BT030178-1|ABN49317.1| 217|Drosophila melanogaster IP17826p pro... 29 6.3
BT030163-1|ABN49302.1| 217|Drosophila melanogaster IP17726p pro... 29 6.3
AE013599-139|AAF57287.1| 683|Drosophila melanogaster CG7856-PA ... 29 6.3
AY061315-1|AAL28863.1| 1197|Drosophila melanogaster LD23303p pro... 29 8.4
AJ276896-1|CAC35050.1| 1197|Drosophila melanogaster putative hel... 29 8.4
AE014297-3389|AAF56187.2| 1197|Drosophila melanogaster CG10210-P... 29 8.4
>AF132144-1|AAD33591.1| 620|Drosophila melanogaster
endo/exonuclease Mre11 protein.
Length = 620
Score = 253 bits (619), Expect = 2e-67
Identities = 119/190 (62%), Positives = 151/190 (79%), Gaps = 4/190 (2%)
Frame = +3
Query: 153 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 332
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGDLF A PS
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDAVPSQ 71
Query: 333 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISYPILSIHGNH 500
N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+ P+ SIHGNH
Sbjct: 72 NALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIHGNH 131
Query: 501 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 680
DDP G G +SSLD+LS +GLVNYFG+WTD T V ISPVL++KG ++LALYGLSH+ D RL
Sbjct: 132 DDPSGFGRLSSLDLLSTSGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRL 191
Query: 681 SRLFAEKKVE 710
+RL + KV+
Sbjct: 192 ARLIKDFKVK 201
>AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-PA
protein.
Length = 620
Score = 253 bits (619), Expect = 2e-67
Identities = 119/190 (62%), Positives = 151/190 (79%), Gaps = 4/190 (2%)
Frame = +3
Query: 153 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 332
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGDLF A PS
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDAVPSQ 71
Query: 333 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISYPILSIHGNH 500
N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+ P+ SIHGNH
Sbjct: 72 NALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIHGNH 131
Query: 501 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 680
DDP G G +SSLD+LS +GLVNYFG+WTD T V ISPVL++KG ++LALYGLSH+ D RL
Sbjct: 132 DDPSGFGRLSSLDLLSTSGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRL 191
Query: 681 SRLFAEKKVE 710
+RL + KV+
Sbjct: 192 ARLIKDFKVK 201
>AF201919-1|AAF71697.1| 97|Drosophila melanogaster CRC-D protein.
Length = 97
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 222 GEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCT 353
G+D + EEV SL + D ++++ DL D+ + + C+ CT
Sbjct: 54 GDDEALTLEEVASLQLLSDEEMVVEIFDLKDEGRYILVCLLFCT 97
>AE014296-3491|AAF51688.1| 523|Drosophila melanogaster CG10510-PA
protein.
Length = 523
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/107 (21%), Positives = 47/107 (43%)
Frame = +3
Query: 114 KIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLIL 293
KI + ++ + LRIL L V+ + +A + +Q + + ++
Sbjct: 321 KIELNQEMDREITHEKLRILTGECYELTKQMEKHVKSGELLLALS-ITCRKLQTESEKVI 379
Query: 294 LGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR 434
LGG++FD+ + V+ FK + K + + L+ ++NF R
Sbjct: 380 LGGEVFDETEVDVDEYFKLQTLNLKDHVDMTEEELVELNKSLRNFWR 426
>AE014134-3388|ABC65922.1| 105|Drosophila melanogaster CG8669-PD,
isoform D protein.
Length = 105
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 222 GEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCT 353
G+D + EEV SL + D ++++ DL D+ + + C+ CT
Sbjct: 62 GDDEALTLEEVASLQLLSDEEMVVEIFDLKDEGRYILVCLLFCT 105
>AY058403-1|AAL13632.1| 523|Drosophila melanogaster GH17186p
protein.
Length = 523
Score = 29.9 bits (64), Expect = 3.6
Identities = 23/107 (21%), Positives = 47/107 (43%)
Frame = +3
Query: 114 KIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLIL 293
KI + ++ + LRIL L V+ + +A + +Q + + ++
Sbjct: 321 KIELNQEMDREITHEKLRILTGECYELTKQMEKHVKSGELLLALS-ITCRKLQTESEKVI 379
Query: 294 LGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR 434
LGG++FD+ + V+ FK + K + + L+ ++NF R
Sbjct: 380 LGGEVFDETEVDVDEYFKLQILNLKDHVDMTEEELVELNKSLRNFWR 426
>BT030178-1|ABN49317.1| 217|Drosophila melanogaster IP17826p
protein.
Length = 217
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 113 TCTTRL*CYLKQLKYNYADWR 51
TC TRL +KQL+ NYA W+
Sbjct: 43 TCKTRLETIVKQLQDNYAKWQ 63
>BT030163-1|ABN49302.1| 217|Drosophila melanogaster IP17726p
protein.
Length = 217
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 113 TCTTRL*CYLKQLKYNYADWR 51
TC TRL +KQL+ NYA W+
Sbjct: 43 TCKTRLETIVKQLQDNYAKWQ 63
>AE013599-139|AAF57287.1| 683|Drosophila melanogaster CG7856-PA
protein.
Length = 683
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 295 KSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR*ISEAINILSVSSGDHAEMSFSII 119
K+ KS TAR S K+ + SSPR+ S + + + S + D+ E +F+++
Sbjct: 387 KAPKSRKETTARSNLSRKSYRRSSPRSRSRGSRANALESPLQ-KSEDTPDNVEYAFALV 444
>AY061315-1|AAL28863.1| 1197|Drosophila melanogaster LD23303p
protein.
Length = 1197
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 282 DLILLGGDLFDQAKPSVNCMFKCTEIIRK--YCLGDKPVSIE-LLSDQI 419
D+ L+ GDL Q +P+ +C+ TEI+R YC D +E ++ D++
Sbjct: 331 DVGLITGDL--QIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEV 377
>AJ276896-1|CAC35050.1| 1197|Drosophila melanogaster putative
helicase Ski2 protein.
Length = 1197
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 282 DLILLGGDLFDQAKPSVNCMFKCTEIIRK--YCLGDKPVSIE-LLSDQI 419
D+ L+ GDL Q +P+ +C+ TEI+R YC D +E ++ D++
Sbjct: 331 DVGLITGDL--QIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEV 377
>AE014297-3389|AAF56187.2| 1197|Drosophila melanogaster CG10210-PA
protein.
Length = 1197
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 282 DLILLGGDLFDQAKPSVNCMFKCTEIIRK--YCLGDKPVSIE-LLSDQI 419
D+ L+ GDL Q +P+ +C+ TEI+R YC D +E ++ D++
Sbjct: 331 DVGLITGDL--QIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEV 377
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,725,879
Number of Sequences: 53049
Number of extensions: 617219
Number of successful extensions: 1327
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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