Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5l01
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical pr...   177   6e-45
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z72511-9|CAA96661.2|  223|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL132952-1|CAB61134.2|  214|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical
           protein ZC302.1 protein.
          Length = 728

 Score =  177 bits (431), Expect = 6e-45
 Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
 Frame = +3

Query: 153 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 332
           +D ++IL+A+DIH G+ EN      D+   FEEVL +A +  VD+ILLGGDLF +  PS 
Sbjct: 63  EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSR 122

Query: 333 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNH 500
               + T+++R+YCL   P+++E LSD   NF+++    VNY D NLN+  PI +IHGNH
Sbjct: 123 EVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNH 182

Query: 501 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 680
           DD  G+G +++LD+L  +GLVN FGK ++     +SP+LL+KG TRLALYG+   +D RL
Sbjct: 183 DDLSGKG-LTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRL 241

Query: 681 SRLFAEKKV 707
            R F    +
Sbjct: 242 VRAFKNNSI 250


>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 169 ILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 53
           +  +S+  H E S    I+ +  DY V SNN+N ++PIG
Sbjct: 786 VAEISAYHHGEQSLMGTIVNLAQDY-VGSNNINLLLPIG 823


>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 169 ILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 53
           +  +S+  H E S    I+ +  DY V SNN+N ++PIG
Sbjct: 786 VAEISAYHHGEQSLMGTIVNLAQDY-VGSNNINLLLPIG 823


>Z72511-9|CAA96661.2|  223|Caenorhabditis elegans Hypothetical
           protein F55A11.8 protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 237 IAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 338
           +AFEEVL++    +VD  + G D+F+ A   V+C
Sbjct: 69  VAFEEVLTVQELNEVDAFIYGDDMFEYA--DVHC 100


>AL132952-1|CAB61134.2|  214|Caenorhabditis elegans Hypothetical
           protein Y51H4A.1 protein.
          Length = 214

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -1

Query: 346 LNIQLTEGLA*SNRSPPKSIKSTSHCTARDKTSSKAIKLS--SPRTGSFSM 200
           + I++ E    + ++P  S KSTS C + +  S ++I+ S  SPR  SF +
Sbjct: 88  IQIKVPEVEEDTEKTPAGSPKSTSSCISSEILSEQSIEFSSISPRPSSFPL 138


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +3

Query: 357 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSL 536
           + ++YC    P ++  ++ Q  +F  T   +DP   +SY   +I    +D     S +S 
Sbjct: 217 VFQRYC---PPGTVFNINQQSCDFQCTT--DDPTTTVSYSTSTITTPQEDDSEYSSTTSA 271

Query: 537 DILSIT 554
           D++S T
Sbjct: 272 DVISTT 277


>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
           protein C28A5.2 protein.
          Length = 1218

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 396 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 566
           +  L+  ++   RT NY   +LN+SY +        +P GQ S +  +I+ I   ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570


>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
           protein C28A5.1 protein.
          Length = 1223

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 396 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 566
           +  L+  ++   RT NY   +LN+SY +        +P GQ S +  +I+ I   ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,173,792
Number of Sequences: 27780
Number of extensions: 331908
Number of successful extensions: 755
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)