Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k20
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111020-1|AAI11021.1|  472|Homo sapiens methyltransferase like ...    40   0.007
AK026670-1|BAB15520.1|  205|Homo sapiens protein ( Homo sapiens ...    40   0.007

>BC111020-1|AAI11021.1|  472|Homo sapiens methyltransferase like 4
           protein.
          Length = 472

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +3

Query: 495 IQNEYFLIPPNSRFYYGSVNEECHKLD-SGIFDLVIADPPWWNRYIRRLKNANEQLSYEM 671
           +  + +L+PP S F    ++     L+    FD+++ DPPW N+ ++R         Y  
Sbjct: 250 LMGQKYLLPPKSSFLLSDISCMQPLLNYRKTFDVIVIDPPWQNKSVKRSNR------YSY 303

Query: 672 MYNEDIAAIPLSNLLSSNCL 731
           +    I  IP+  L + NCL
Sbjct: 304 LSPLQIKQIPIPKLAAPNCL 323


>AK026670-1|BAB15520.1|  205|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23017 fis, clone LNG00879. ).
          Length = 205

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +3

Query: 495 IQNEYFLIPPNSRFYYGSVNEECHKLD-SGIFDLVIADPPWWNRYIRRLKNANEQLSYEM 671
           +  + +L+PP S F    ++     L+    FD+++ DPPW N+ ++R         Y  
Sbjct: 103 LMGQKYLLPPKSSFLLSDISCMQPLLNYRKTFDVIVIDPPWQNKSVKRSNR------YSY 156

Query: 672 MYNEDIAAIPLSNLLSSNCL 731
           +    I  IP+  L + NCL
Sbjct: 157 LSPLQIQQIPIPKLAAPNCL 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,131,882
Number of Sequences: 237096
Number of extensions: 1781524
Number of successful extensions: 3169
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3169
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)