Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k20
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U31961-16|AAA84415.1|  335|Drosophila melanogaster protein ( Dro...    69   9e-12
AY122180-1|AAM52692.1|  359|Drosophila melanogaster LD37858p pro...    69   9e-12
AE014297-2253|AAF55351.1|  359|Drosophila melanogaster CG14906-P...    69   9e-12
BT015235-1|AAT94464.1| 1688|Drosophila melanogaster RE05635p pro...    33   0.53 
AY058710-1|AAL13939.1| 1043|Drosophila melanogaster LD44304p pro...    33   0.53 
AJ276394-1|CAC01697.1| 1688|Drosophila melanogaster WOC protein ...    33   0.53 
AE014297-4103|AAF56688.2| 1688|Drosophila melanogaster CG5965-PA...    33   0.53 
AE013599-1168|AAO41410.1|  413|Drosophila melanogaster CG30018-P...    30   2.8  
AE013599-1920|AAS64912.1|  160|Drosophila melanogaster CG33469-P...    29   6.5  

>U31961-16|AAA84415.1|  335|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 335

 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
 Frame = +3

Query: 156 EFIAKLYKDVLFEENYQSYTLSAKLFSITSEVRTRKRKKVYEELSIETSKIKRMYEEFIA 335
           +F   L    L  E Y  + L ++LF    +   +K  K  EE      K K   E+  +
Sbjct: 47  KFAVFLDHKTLINEAYDEFKLKSELF----QFHAKKTDKGIEEDKTRKRKRKAGVEDASS 102

Query: 336 ----KVPNSIKERISQKYNILDTSSVRDFSASLFQSTIFDHHSINGGSTSDIPLKCKIQN 503
                + N   E +S+     D+S ++      +   +   H  N        L+     
Sbjct: 103 LEDLHLVNEYLELLSKPVEPEDSSPMKRHWEDGYN--VPQLHGANESGRMQRFLRVDGSR 160

Query: 504 EYFLIPPNSRFYYGSVNEECHKLDSGI--FDLVIADPPWWNRYIRRLKNANEQLSYEMMY 677
             +LIP  SRF+  +V+     L   +  +DL++ DPPW N+YIRRLK A  +L Y M+ 
Sbjct: 161 GVYLIPNQSRFFNHNVDNLPALLHQLLPAYDLIVLDPPWRNKYIRRLKRAKPELGYSMLS 220

Query: 678 NEDIAAIPLSNL 713
           NE ++ IPLS L
Sbjct: 221 NEQLSHIPLSKL 232


>AY122180-1|AAM52692.1|  359|Drosophila melanogaster LD37858p
           protein.
          Length = 359

 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
 Frame = +3

Query: 156 EFIAKLYKDVLFEENYQSYTLSAKLFSITSEVRTRKRKKVYEELSIETSKIKRMYEEFIA 335
           +F   L    L  E Y  + L ++LF    +   +K  K  EE      K K   E+  +
Sbjct: 12  KFAVFLDHKTLINEAYDEFKLKSELF----QFHAKKTDKGIEEDKTRKRKRKAGVEDASS 67

Query: 336 ----KVPNSIKERISQKYNILDTSSVRDFSASLFQSTIFDHHSINGGSTSDIPLKCKIQN 503
                + N   E +S+     D+S ++      +   +   H  N        L+     
Sbjct: 68  LEDLHLVNEYLELLSKPVEPEDSSPMKRHWEDGYN--VPQLHGANESGRMQRFLRVDGSR 125

Query: 504 EYFLIPPNSRFYYGSVNEECHKLDSGI--FDLVIADPPWWNRYIRRLKNANEQLSYEMMY 677
             +LIP  SRF+  +V+     L   +  +DL++ DPPW N+YIRRLK A  +L Y M+ 
Sbjct: 126 GVYLIPNQSRFFNHNVDNLPALLHQLLPAYDLIVLDPPWRNKYIRRLKRAKPELGYSMLS 185

Query: 678 NEDIAAIPLSNL 713
           NE ++ IPLS L
Sbjct: 186 NEQLSHIPLSKL 197


>AE014297-2253|AAF55351.1|  359|Drosophila melanogaster CG14906-PA
           protein.
          Length = 359

 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
 Frame = +3

Query: 156 EFIAKLYKDVLFEENYQSYTLSAKLFSITSEVRTRKRKKVYEELSIETSKIKRMYEEFIA 335
           +F   L    L  E Y  + L ++LF    +   +K  K  EE      K K   E+  +
Sbjct: 12  KFAVFLDHKTLINEAYDEFKLKSELF----QFHAKKTDKGIEEDKTRKRKRKAGVEDASS 67

Query: 336 ----KVPNSIKERISQKYNILDTSSVRDFSASLFQSTIFDHHSINGGSTSDIPLKCKIQN 503
                + N   E +S+     D+S ++      +   +   H  N        L+     
Sbjct: 68  LEDLHLVNEYLELLSKPVEPEDSSPMKRHWEDGYN--VPQLHGANESGRMQRFLRVDGSR 125

Query: 504 EYFLIPPNSRFYYGSVNEECHKLDSGI--FDLVIADPPWWNRYIRRLKNANEQLSYEMMY 677
             +LIP  SRF+  +V+     L   +  +DL++ DPPW N+YIRRLK A  +L Y M+ 
Sbjct: 126 GVYLIPNQSRFFNHNVDNLPALLHQLLPAYDLIVLDPPWRNKYIRRLKRAKPELGYSMLS 185

Query: 678 NEDIAAIPLSNL 713
           NE ++ IPLS L
Sbjct: 186 NEQLSHIPLSKL 197


>BT015235-1|AAT94464.1| 1688|Drosophila melanogaster RE05635p protein.
          Length = 1688

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +3

Query: 261  KRKKVYEELSIETSKIK---RMYEEFIAKVPNSIKERISQKYNILDTSSVRD 407
            ++KKVYE+   E + ++   R+YE +++K P S+K R    Y   + S V D
Sbjct: 1602 RKKKVYEQQENEENPLRCPVRLYEFYLSKCPESVKTRNDVFYLQPERSCVPD 1653


>AY058710-1|AAL13939.1| 1043|Drosophila melanogaster LD44304p protein.
          Length = 1043

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +3

Query: 261  KRKKVYEELSIETSKIK---RMYEEFIAKVPNSIKERISQKYNILDTSSVRD 407
            ++KKVYE+   E + ++   R+YE +++K P S+K R    Y   + S V D
Sbjct: 957  RKKKVYEQQENEENPLRCPVRLYEFYLSKCPESVKTRNDVFYLQPERSCVPD 1008


>AJ276394-1|CAC01697.1| 1688|Drosophila melanogaster WOC protein
            protein.
          Length = 1688

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +3

Query: 261  KRKKVYEELSIETSKIK---RMYEEFIAKVPNSIKERISQKYNILDTSSVRD 407
            ++KKVYE+   E + ++   R+YE +++K P S+K R    Y   + S V D
Sbjct: 1602 RKKKVYEQQENEENPLRCPVRLYEFYLSKCPESVKTRNDVFYLQPERSCVPD 1653


>AE014297-4103|AAF56688.2| 1688|Drosophila melanogaster CG5965-PA
            protein.
          Length = 1688

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +3

Query: 261  KRKKVYEELSIETSKIK---RMYEEFIAKVPNSIKERISQKYNILDTSSVRD 407
            ++KKVYE+   E + ++   R+YE +++K P S+K R    Y   + S V D
Sbjct: 1602 RKKKVYEQQENEENPLRCPVRLYEFYLSKCPESVKTRNDVFYLQPERSCVPD 1653


>AE013599-1168|AAO41410.1|  413|Drosophila melanogaster CG30018-PC
           protein.
          Length = 413

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 350 DKRENFTKIQYFGYIVSKRLFGIIISVNNF*SSQYKRW 463
           + R+ F     F Y +S    GIIIS+N F     ++W
Sbjct: 262 ENRDQFVFYSTFAYGISAIPLGIIISINQFWEEDLRKW 299


>AE013599-1920|AAS64912.1|  160|Drosophila melanogaster CG33469-PA
           protein.
          Length = 160

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = +3

Query: 351 IKERISQKY---NILDTSSVRDFSASLFQSTIFDHHSINGGSTSDIPLKCKIQNEYFLIP 521
           + ERI +KY   N+ +   +  FS   F   + ++ S     TS   L+  + N Y+   
Sbjct: 61  VLERIRKKYGNRNVREIFQIATFSGVGFHKVVREYFSNLKWFTSRNQLEAPL-NSYY--- 116

Query: 522 PNSRFYYGSVNEECHKLDSGIFDLVIADPPWWNRY 626
            N      +V++  +K    IFD ++    W+ RY
Sbjct: 117 -NDERLVKTVSDLHNKEQKRIFDYIMIQHAWFERY 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,219,864
Number of Sequences: 53049
Number of extensions: 580368
Number of successful extensions: 1565
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)