Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k20
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28944-13|AAA68372.1|  365|Caenorhabditis elegans Hypothetical p...    46   3e-05
Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z82282-5|CAB05270.1|  555|Caenorhabditis elegans Hypothetical pr...    32   0.48 
U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF036694-8|AAB88346.2|  607|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF026204-7|AAB71247.1|  272|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U28944-13|AAA68372.1|  365|Caenorhabditis elegans Hypothetical
           protein C18A3.1 protein.
          Length = 365

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = +3

Query: 510 FLIPPNSRFYYGSVN--EECHKLDSGIFDLVIADPPWWNRYIRRLKNANEQLSYEMMYNE 683
           F IPP S F+ G V   E+  +    +FDL+IADPPW+++ ++R +    Q+  E++   
Sbjct: 158 FYIPPKSTFHVGDVKDIEQYSRAHDLLFDLIIADPPWFSKSVKRKR--TYQMDEEVLDCL 215

Query: 684 DIAAI 698
           DI  I
Sbjct: 216 DIPVI 220


>Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical
           protein K03D7.9 protein.
          Length = 211

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = -1

Query: 585 IYHCQVYDILHLQSHNKTLNLVVSESIHFVFYILTVCR-TCYHRLYCDDQKLLTEIMMPK 409
           I++C VY  L   + + T   +     +F+F+I+T+     Y+ LY   +KL ++++   
Sbjct: 71  IFYCWVYGSLLGANSSPTWEDIAFVVYNFIFFIMTLTSGLFYYHLYQLLKKLHSDVIPET 130

Query: 408 SLLLTMYPKYCIFVKFS 358
            +L  + P Y + V F+
Sbjct: 131 QILYRVVPIYSLQVVFT 147


>Z82282-5|CAB05270.1|  555|Caenorhabditis elegans Hypothetical
           protein T07G12.5 protein.
          Length = 555

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -2

Query: 689 YVLIVHHLVT*LFIGIFQSSDISIPPWRISDHKIKYTTVKFMTFFIY 549
           ++ IV  L   LF+ I +  ++ IP + +S+ K K+T  K  + F Y
Sbjct: 172 WISIVEFLTLILFVVILERYEVPIPIFSLSEKKFKFTRQKIFSQFPY 218


>U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical
           protein F16H11.1 protein.
          Length = 501

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -3

Query: 409 KSLTDDVSKILYFCEILSFIEFGTFAINSSYILLILEVSILNSS 278
           KS T +  K+L+F   +   +FG  ++  S++ LI E+S + +S
Sbjct: 136 KSTTSEWLKVLWFVPFIMVFQFGWASVQISHLALIPELSSVPAS 179


>AF036694-8|AAB88346.2|  607|Caenorhabditis elegans Hypothetical
           protein CD4.8 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
 Frame = +3

Query: 141 LIDHWEFIAKLYKDVLFEENYQ--SYTLSAKLFSITSEV-------RTRKRKKVYEELSI 293
           LIDH    ++ YK+V+ EEN Q  +Y  S +L S   EV       R  K + ++E  + 
Sbjct: 368 LIDH----SQEYKEVMMEENNQPTTYVKSLQLDSDDDEVQYIGAMKRQSKPEPIFEGFAP 423

Query: 294 ETSKIKRMYEEFIAKVPNSIKERISQKYNILDTSS 398
             S    + EE    VP   +++IS   N   TS+
Sbjct: 424 HNSNSDHVQEEQKTGVPLFDRQQISLSANNGATSA 458


>AF026204-7|AAB71247.1|  272|Caenorhabditis elegans Hypothetical
           protein C30E1.2 protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 66  THFLNCVSNKRRKIMSLVIKQGNCCLIDHWEFIAKL-YKDVLFEENYQSYTLS 221
           T  L C+SN    +  L++  G C +  ++  I K+ ++   F+++Y  YT++
Sbjct: 138 TATLPCISNSLLYVAILLVASGQCQIYLYYYIIQKIRFERKSFKKSYMFYTVT 190


>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +3

Query: 84  VSNKRRKIMSLVIKQGNCCLIDHWEFIAKLYKDVLFE-ENYQSYTLSAKLFSITSEVRTR 260
           + N + ++  L+ KQGN  L      +   YKD+  + EN +    SAKL      V T 
Sbjct: 368 IVNAKNEVRILLEKQGNQDLTKRLTKVENDYKDISQQRENMELGGESAKLREKLDTVITD 427

Query: 261 KRKKVYEELSI--ETSKIKRMYEE 326
            ++K  E+ +I  + ++++R  E+
Sbjct: 428 YKRKEEEKYTIQRDINQLRRKIEQ 451


>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +3

Query: 84  VSNKRRKIMSLVIKQGNCCLIDHWEFIAKLYKDVLFE-ENYQSYTLSAKLFSITSEVRTR 260
           + N + ++  L+ KQGN  L      +   YKD+  + EN +    SAKL      V T 
Sbjct: 368 IVNAKNEVRILLEKQGNQDLTKRLTKVENDYKDISQQRENMELGGESAKLREKLDTVITD 427

Query: 261 KRKKVYEELSI--ETSKIKRMYEE 326
            ++K  E+ +I  + ++++R  E+
Sbjct: 428 YKRKEEEKYTIQRDINQLRRKIEQ 451


>Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical
           protein R07E5.1 protein.
          Length = 812

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +3

Query: 156 EFIAKLYKDVLFEENYQSYTL---SAKLFSITSEVRTRKRKKVYEELSIETSKIKRMYEE 326
           E I +  +D +  E+   Y +   S K  +   E   +KRK  +E  +   S I +M+E+
Sbjct: 80  EQIKQRAEDFMDAEDLGEYGIGNRSIKQTAAFGEGAGQKRKMAWERDTTSISTITQMFED 139

Query: 327 FIAKVPNSIKERI 365
            +  V NSI  R+
Sbjct: 140 VVKPVSNSIGVRM 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,034,927
Number of Sequences: 27780
Number of extensions: 338900
Number of successful extensions: 958
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)