Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k19
         (552 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   0.72 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   0.72 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   0.72 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   3.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.0  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   5.0  
EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.         23   6.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 0.72
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 483 PSTCTIRPTHQFHEYLFEISHGVHILIGGEDAGVGLG 373
           PS+   +PTHQ H +     HG  +  GG   G G G
Sbjct: 271 PSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGGG 307


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 0.72
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 483 PSTCTIRPTHQFHEYLFEISHGVHILIGGEDAGVGLG 373
           PS+   +PTHQ H +     HG  +  GG   G G G
Sbjct: 271 PSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGGG 307


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 0.72
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 483 PSTCTIRPTHQFHEYLFEISHGVHILIGGEDAGVGLG 373
           PS+   +PTHQ H +     HG  +  GG   G G G
Sbjct: 223 PSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGGG 259


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -3

Query: 280  RVLIRPSLGTCRLRRDRHRPAPDPVPERRGNRSGHTSLSHLF 155
            R  +  +  T   +R R  P P P P   G R+   SL   +
Sbjct: 1107 RTSLYSARNTSEEQRGRRHPTPSPPPRAVGRRAEVRSLGERY 1148


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 163  EKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 279
            EK K + N  RDA V+ LER   D     K +D    KL
Sbjct: 1283 EKPKQESN--RDADVKDLERTIWDRSKQLKIIDLGALKL 1319


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 347 PPGSSRPPAMS 315
           PPGS RPP +S
Sbjct: 11  PPGSHRPPGLS 21


>EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.
          Length = 64

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +2

Query: 128 YRVNGSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDA 292
           YRVNG +P  EM  R   +     +W+ V           T     PD +S T+A
Sbjct: 3   YRVNGPKP--EMLARVGAQVAGGFMWWWVLRHLFHEYEHITGEFDYPDPSSWTNA 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,711
Number of Sequences: 2352
Number of extensions: 12479
Number of successful extensions: 50
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)