Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k16
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.6  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   7.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              22   9.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 1    DSSRTTRSVHQLQNA*GILQNFNYTTAHYN 90
            DS  TT+++  L++    L +FNY   H N
Sbjct: 1497 DSDETTKNLPWLKSVSNFLGSFNYYCDHQN 1526


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 222 LPIISTIDLFPNHIS 178
           +P++ T+DL  NHIS
Sbjct: 451 VPLLRTLDLGENHIS 465


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 114 R*KHLILQGIIDLRNGCPTALWIC 185
           R K  +L   +D+RN   TA W C
Sbjct: 565 RDKRCLLVVALDVRNAFNTASWQC 588


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 189 SEINQSLKLLVENL--LTSSIDLPAGEPEMFSYKNTQIKNRL 308
           SE+N+SLKLL   +  L+  + L   E +    KN  ++  L
Sbjct: 136 SEMNESLKLLAMQVAQLSKELSLCRKELQESLMKNAALEREL 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,403
Number of Sequences: 2352
Number of extensions: 7135
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)