Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k15
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014603-1|AAH14603.1|  233|Homo sapiens GLI pathogenesis-relate...    35   0.22 
AY358731-1|AAQ89093.1|  242|Homo sapiens ALKN2972 protein.             35   0.22 

>BC014603-1|AAH14603.1|  233|Homo sapiens GLI pathogenesis-related 1
           like 1 protein.
          Length = 233

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 481 WDRELAFLAQRLSDQCQFVHDDCRATVRYPYAG-QSVGEVRW 603
           WD+ LA +A+  ++QC+F H+DC       YA  + VGE  W
Sbjct: 60  WDKGLAKMAKAWANQCKFEHNDCLDKSYKCYAAFEYVGENIW 101


>AY358731-1|AAQ89093.1|  242|Homo sapiens ALKN2972 protein.
          Length = 242

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 481 WDRELAFLAQRLSDQCQFVHDDCRATVRYPYAG-QSVGEVRW 603
           WD+ LA +A+  ++QC+F H+DC       YA  + VGE  W
Sbjct: 60  WDKGLAKMAKAWANQCKFEHNDCLDKSYKCYAAFEYVGENIW 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,702,833
Number of Sequences: 237096
Number of extensions: 2070494
Number of successful extensions: 8370
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8320
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)