Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k08
         (760 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5N8G8 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q58AA2 Cluster: Putative uncharacterized protein srxa-1...    35   1.9  
UniRef50_Q8RCL1 Cluster: Putative uncharacterized protein TTE041...    35   2.5  
UniRef50_Q4Z0X0 Cluster: Asparagine--tRNA ligase, putative; n=2;...    34   4.4  
UniRef50_UPI00015BD1D7 Cluster: UPI00015BD1D7 related cluster; n...    33   5.8  

>UniRef50_A5N8G8 Cluster: Putative uncharacterized protein; n=1;
           Clostridium kluyveri DSM 555|Rep: Putative
           uncharacterized protein - Clostridium kluyveri DSM 555
          Length = 299

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 21/66 (31%), Positives = 36/66 (54%)
 Frame = -1

Query: 208 YNTNKIPNIYYKTTIKQNYKRDSKGF*KTTVNMFVSNNVYFLHG*TIYCIYSIINKKIYF 29
           +N+NK+   +YK   ++ YK D K + K+  N F   +  ++       +Y+ I +K YF
Sbjct: 146 FNSNKLKICFYKINEEEKYK-DFKSYKKSDKNKFEKIDSKYVWVNNYTLLYNEIFRKEYF 204

Query: 28  YDHPLN 11
           Y +PLN
Sbjct: 205 Y-YPLN 209


>UniRef50_Q58AA2 Cluster: Putative uncharacterized protein srxa-11;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein srxa-11 - Caenorhabditis elegans
          Length = 307

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = -1

Query: 322 IHITHKTLHYSYNFLLAFIIFSLPKFSHFFYISVQLF*YNTNKIPNIYYKTTIKQNYKRD 143
           I I    ++ SY  +L   IFS   F  FFY +++ +  N +K+P IY  T I  N+   
Sbjct: 2   ISIVRWIVYGSYTLVL---IFSTT-FLIFFYWTIRTYKKN-DKLPTIYIYTMILCNFGLI 56

Query: 142 SKGF*KTTVNMFVSNNVYF-LHG*T-IYCIYSIINKKIYFYDHPLNCL 5
            +GF    +   +S + Y+  H  T IY   ++ N  +Y++   L  L
Sbjct: 57  FRGFLDGVIPEIISKDAYYWFHNPTGIY--LNVFNDFVYYFPMTLTIL 102


>UniRef50_Q8RCL1 Cluster: Putative uncharacterized protein TTE0415;
           n=1; Thermoanaerobacter tengcongensis|Rep: Putative
           uncharacterized protein TTE0415 - Thermoanaerobacter
           tengcongensis
          Length = 213

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -1

Query: 289 YNFLLAFIIFSLPKFSHFFYISVQLF*YNTNKIPNIYYKTTIKQNYK 149
           Y  L+A I+ +   + ++ Y    +F YNTNK P++ Y T  K N+K
Sbjct: 16  YVLLIAVILVAFVGYDYYNYNRRNVFLYNTNKAPDLNYSTQSK-NFK 61


>UniRef50_Q4Z0X0 Cluster: Asparagine--tRNA ligase, putative; n=2;
           Plasmodium (Vinckeia)|Rep: Asparagine--tRNA ligase,
           putative - Plasmodium berghei
          Length = 886

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -1

Query: 208 YNTNK-IPNIYYKTTIKQNYKRDSKGF*KT-TVNMFVSNNV-YFLHG*TIYCIYSIINKK 38
           +N NK + NIYY   I  NYK D K        N+   NN+   LH   +Y   + INK 
Sbjct: 537 FNKNKQLHNIYYNNKIANNYKVDIKNCENNYETNISYPNNINQNLHSQIVYSFLNKINKN 596

Query: 37  IYFYD 23
             + D
Sbjct: 597 EIYND 601


>UniRef50_UPI00015BD1D7 Cluster: UPI00015BD1D7 related cluster; n=1;
           unknown|Rep: UPI00015BD1D7 UniRef100 entry - unknown
          Length = 642

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -1

Query: 304 TLHYSYNFLLAFIIFSLPKFSHFFYISVQLF*YNTNKIPNIYYKTTIKQNYKRDSKGF*K 125
           T+  S+N+   +   S P + + F++S   F  + NKI   Y+   + ++Y   ++GF  
Sbjct: 488 TIEPSFNYPYGYYNMSSPIYMNIFWLSNTYFINSFNKIEFDYFVNKLNKSYHSPNEGF-- 545

Query: 124 TTVNMFVS-NNVYF 86
            ++ +F    N+YF
Sbjct: 546 -SIKLFDRYKNIYF 558


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,443,239
Number of Sequences: 1657284
Number of extensions: 6401852
Number of successful extensions: 12927
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12911
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)