Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k08
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   6.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 355 TSLNFNILNT*IHITHKTLHYSYNFLLAFIIFSLPKFSHFFYIS 224
           T L   +L   + I    +   ++F+  F+   LP +S+FFY+S
Sbjct: 51  TPLPLTLLYKLLGIIQFPISAHFSFMSRFLC--LPFYSYFFYLS 92


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 355 TSLNFNILNT*IHITHKTLHYSYNFLLAFIIFSLPKFSHFFYIS 224
           T L   +L   + I    +   ++F+  F+   LP +S+FFY+S
Sbjct: 7   TPLPLTLLYKLLGIIQFPISAHFSFMSRFLC--LPFYSYFFYLS 48


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 89  VHII*YKHIYSRFLKSF*VSFIVLFYCCFII 181
           VH++    IY   +  F +  I  FYC FII
Sbjct: 125 VHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 202 TNKIPNIYYKTTIKQNYKRD 143
           TN+I  +Y  T +K  ++RD
Sbjct: 450 TNEIKGVYNMTNLKFYHRRD 469


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,981
Number of Sequences: 336
Number of extensions: 1965
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)