Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5k08
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77652-10|CAI70404.1|  307|Caenorhabditis elegans Hypothetical p...    35   0.055

>Z77652-10|CAI70404.1|  307|Caenorhabditis elegans Hypothetical
           protein C06B3.12 protein.
          Length = 307

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = -1

Query: 322 IHITHKTLHYSYNFLLAFIIFSLPKFSHFFYISVQLF*YNTNKIPNIYYKTTIKQNYKRD 143
           I I    ++ SY  +L   IFS   F  FFY +++ +  N +K+P IY  T I  N+   
Sbjct: 2   ISIVRWIVYGSYTLVL---IFSTT-FLIFFYWTIRTYKKN-DKLPTIYIYTMILCNFGLI 56

Query: 142 SKGF*KTTVNMFVSNNVYF-LHG*T-IYCIYSIINKKIYFYDHPLNCL 5
            +GF    +   +S + Y+  H  T IY   ++ N  +Y++   L  L
Sbjct: 57  FRGFLDGVIPEIISKDAYYWFHNPTGIY--LNVFNDFVYYFPMTLTIL 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,433,055
Number of Sequences: 27780
Number of extensions: 163432
Number of successful extensions: 337
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)